oandrefonseca / btc-sc-notebooks Public

Scripts and Notebooks related to the Single-cell pipeline

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 79 Commits
.DS_Store		.DS_Store
.Renviron		.Renviron
.gitignore		.gitignore
README.md		README.md
cell_markers_database.csv		cell_markers_database.csv
external_running.R		external_running.R
meta_programs_database.csv		meta_programs_database.csv
notebook.Rproj		notebook.Rproj
notebook_batch_correction.Rmd		notebook_batch_correction.Rmd
notebook_batch_evaluation.Rmd		notebook_batch_evaluation.Rmd
notebook_cell_annotation.Rmd		notebook_cell_annotation.Rmd
notebook_cell_clustering.Rmd		notebook_cell_clustering.Rmd
notebook_cell_communication.Rmd		notebook_cell_communication.Rmd
notebook_cell_stratification.Rmd		notebook_cell_stratification.Rmd
notebook_differential_expression.Rmd		notebook_differential_expression.Rmd
notebook_dimensionality_reduction.Rmd		notebook_dimensionality_reduction.Rmd
notebook_doublet_detection.Rmd		notebook_doublet_detection.Rmd
notebook_merge.Rmd		notebook_merge.Rmd
notebook_meta_programs.Rmd		notebook_meta_programs.Rmd
notebook_quality_control.Rmd		notebook_quality_control.Rmd
notebook_quality_table_report.Rmd		notebook_quality_table_report.Rmd
notebook_trajectory.Rmd		notebook_trajectory.Rmd
sctype_score.R		sctype_score.R