Merge pull request #3166 from obophenotype/3131_NTR_placental_chorion…

…ic_villi

Addresses #3131 NTR placental chorionic villi terms

src/ontology/uberon-edit.obo

@@ -73123,8 +73123,8 @@ id: UBERON:0003532
 name: hindlimb skin
 def: "A zone of skin that is part of a hindlimb [Automatically generated definition]." [OBOL:automatic]
 synonym: "hind limb skin" EXACT [OBOL:automatic]
-synonym: "lower limb skin" EXACT [https://orcid.org/0000-0002-0819-0473]
 synonym: "lower limb skin" EXACT [FMA:23102]
+synonym: "lower limb skin" EXACT [https://orcid.org/0000-0002-0819-0473]
 synonym: "skin of hind limb" EXACT [OBOL:automatic]
 synonym: "skin of hindlimb" EXACT [OBOL:automatic]
 synonym: "skin of lower extremity" EXACT [OBOL:automatic]
@@ -172087,14 +172087,14 @@ relationship: part_of UBERON:0000210 ! tetrapod parietal bone
 id: UBERON:0018347
 name: pars canalicularis of petrosal
 is_a: UBERON:0000064 ! organ part
-relationship: dc-contributor https://orcid.org/0000-0001-7972-3866
+relationship: dc-contributor https://orcid.org/0000-0001-7972-3866 ! T Alexander Dececchi
 relationship: part_of UBERON:0018348 ! petrosal bone
 
 [Term]
 id: UBERON:0018348
 name: petrosal bone
 is_a: UBERON:0001474 ! bone element
-relationship: dc-contributor https://orcid.org/0000-0001-7972-3866
+relationship: dc-contributor https://orcid.org/0000-0001-7972-3866 ! T Alexander Dececchi
 relationship: part_of UBERON:0003128 ! cranium
 property_value: curator_notes "distinct from UBERON:0001694 petrous part of temporal bone; [PMID:19438763]" xsd:string
 
@@ -172154,7 +172154,7 @@ name: sensory pore
 synonym: "sensory canal pore" EXACT [PHENOSCAPE:Wasila]
 intersection_of: UBERON:0008915 ! pore
 intersection_of: part_of UBERON:0001032 ! sensory system
-relationship: dc-contributor https://orcid.org/0000-0003-3162-7490
+relationship: dc-contributor https://orcid.org/0000-0003-3162-7490 ! Wasila M Dahdul
 
 [Term]
 id: UBERON:0018358
@@ -224459,7 +224459,7 @@ synonym: "chorionic villous stroma" EXACT [PMID:12624135]
 synonym: "CVS" RELATED OMO:0003000 [PMID:12624135]
 intersection_of: UBERON:0003891 ! stroma
 intersection_of: part_of UBERON:0007106 ! chorionic villus
-relationship: dc-contributor https://orcid.org/0000-0001-6677-8489
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
 relationship: dc-contributor https://orcid.org/0000-0001-7655-4833
 property_value: dcterms-date "2023-07-04T10:46:17Z" xsd:dateTime
 
@@ -224475,6 +224475,101 @@ relationship: drains UBERON:0016405 ! pulmonary capillary
 relationship: part_of UBERON:0013127 ! pulmonary venous system
 property_value: dcterms-date "2023-10-24T11:26:27Z" xsd:dateTime
 
+[Term]
+id: UBERON:8600025
+name: intervillous space
+def: "An anatomical space that separates the basal plate and the chorionic plate. The intervillous space is filled with endometrial gland secretions during early stages of the pregnancy and later perfused with maternal blood, bathing the chorionic villous tree." [doi:10.1007/978-3-030-84725-8, PMID:32108320]
+is_a: UBERON:0000464 ! anatomical space
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+relationship: part_of UBERON:0001987 ! placenta
+relationship: surrounds UBERON:8600026 ! chorionic villous tree
+property_value: dcterms-date "2023-12-12T11:50:32Z" xsd:dateTime
+
+[Term]
+id: UBERON:8600026
+name: chorionic villous tree
+def: "A tree-like structure formed by chorionic villi that sprouts from the chorionic plate in the placenta. The arborous shape of the chorionic villous tree provides maximal contact area with maternal blood in the intervillous space." [doi:10.1007/978-3-030-84725-8]
+synonym: "placental villous tree" EXACT [PMID:9260835]
+synonym: "villous tree" BROAD [doi:10.1007/978-3-030-84725-8]
+is_a: UBERON:0000061 ! anatomical structure
+relationship: composed_primarily_of UBERON:0007106 ! chorionic villus
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+relationship: part_of UBERON:0001987 ! placenta
+relationship: proximally_connected_to UBERON:0004027 ! chorionic plate
+property_value: dcterms-date "2023-12-12T11:57:24Z" xsd:dateTime
+
+[Term]
+id: UBERON:8600027
+name: chorionic stem villus
+def: "A chorionic villus that provides structural support to the villous tree. A chorionic stem villus is characterized by a condensed fibrous stroma in which fetal arteries, veins, arterioles, and venules are embedded. It represents a distributing framework for fetal chorionic circulation, supplying the floating villi. It can exhibit a diameter ranging from approximately 3000 μm (trunci near the chorionic plate) to 80 μm (smallest ramuli chorii)." [doi:10.1007/978-3-030-84725-8, PMID:9260835]
+synonym: "placental stem villus" EXACT [PMID:9260835]
+is_a: UBERON:0007106 ! chorionic villus
+relationship: branching_part_of UBERON:8600026 ! chorionic villous tree
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+relationship: develops_from UBERON:8600029 ! chorionic immature intermediate villus
+property_value: dcterms-date "2023-12-12T13:00:59Z" xsd:dateTime
+
+[Term]
+id: UBERON:8600028
+name: chorionic mesenchymal villus
+def: "The first generation of a tertiary villus that is derived from a syncytial sprout by the invasion of the mesenchyme, in which blood vessels differentiate through vasculogenesis, and gradually transforms into a new immature intermediate villus. A chorionic mesenchymal villus has a thick trophoblastic covering, and cytotrophoblast cells are interposed between syncytium and the trophoblastic basal lamina over 50–100% of the surface. The stroma is characterized by loosely arranged collagen fibers that enmesh mesenchymal and some villous macrophages. The fetal capillaries are poorly developed." [doi:10.1007/978-3-030-84725-8]
+synonym: "mesenchymal villus" BROAD [doi:10.1007/978-3-030-84725-8]
+is_a: UBERON:0009995 ! tertiary chorionic villus
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+property_value: dcterms-date "2023-12-12T13:38:12Z" xsd:dateTime
+
+[Term]
+id: UBERON:8600029
+name: chorionic immature intermediate villus
+def: "A bulbous, immature chorionic villus that is formed of loose connective tissue with few fetal vessels. A chorionic immature intermediate villus develops from a chorionic mesenchymal villus, and is the forerunner of a chorionic stem villus." [doi:10.1007/978-3-030-84725-8, PMID:487407, PMID:9260835]
+synonym: "immature intermediate villus" RELATED [doi:10.1007/978-3-030-84725-8, PMID:21452443]
+is_a: UBERON:0007106 ! chorionic villus
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+relationship: develops_from UBERON:8600028 ! chorionic mesenchymal villus
+relationship: develops_into UBERON:8600027 ! chorionic stem villus
+property_value: dcterms-date "2023-12-12T13:41:05Z" xsd:dateTime
+
+[Term]
+id: UBERON:8600030
+name: chorionic terminal villus
+def: "The most distal part of a chorionic villus. A chorionic terminal villus is a grape-like structure characterized by a high degree of capillarization and highly dilated sinusoids. A terminal villus has less stroma and a discontinuous cytotrophoblast layer, and contains 4–6 fetal capillaries per cross section. It exhibits a diameter ranging from 40 to about 80 μm." [doi:10.1007/978-3-030-84725-8, PMID:21452443]
+synonym: "terminal villus" BROAD [PMID:21452443]
+is_a: UBERON:8600032 ! chorionic floating villus
+relationship: branching_part_of UBERON:8600026 ! chorionic villous tree
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+property_value: dcterms-date "2023-12-12T13:41:16Z" xsd:dateTime
+
+[Term]
+id: UBERON:8600031
+name: chorionic mature intermediate villus
+def: "A slender branch of a chorionic stem villus. A chorionic mature intermediate villus lacks fetal arterioles and venules in the stroma, which is composed of slender fetal capillaries embedded into a loose connective tissue that is rich in cells but poor in fibers. It exhibits a diameter ranging from 60 to about 100 μm." [doi:10.1007/978-3-030-84725-8, PMID:21452443]
+synonym: "mature intermediate villus" BROAD [PMID:21452443]
+is_a: UBERON:8600032 ! chorionic floating villus
+relationship: branching_part_of UBERON:8600026 ! chorionic villous tree
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+relationship: proximally_connected_to UBERON:8600027 ! chorionic stem villus
+property_value: dcterms-date "2023-12-12T13:41:28Z" xsd:dateTime
+
+[Term]
+id: UBERON:8600032
+name: chorionic floating villus
+def: "A chorionic villus that is not attached to the placental basal plate and it is immersed in maternal blood." [doi:10.1007/978-3-030-84725-8, PMID:31870762, PMID:32513715]
+synonym: "floating villus" BROAD [PMID:31870762]
+synonym: "free-floating villus" BROAD [doi:10.1007/978-3-030-84725-8]
+is_a: UBERON:0007106 ! chorionic villus
+relationship: branching_part_of UBERON:8600026 ! chorionic villous tree
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+property_value: dcterms-date "2023-12-12T13:42:09Z" xsd:dateTime
+
+[Term]
+id: UBERON:8600033
+name: chorionic anchoring villus
+def: "A distal smaller chorionic stem villus that is connected to the maternal side of the placenta (in early gestational stages to the decidua, and later to the developing basal plate) via a cytotrophoblast cell column. A chorionic anchoring villus stabilizes the position of the villous tree in the maternal intervillous bloodstream." [doi:10.1007/978-3-030-84725-8, PMID:15142834, PMID:32513715, PMID:9260835]
+synonym: "anchoring villus" BROAD [PMID:15142834]
+is_a: UBERON:8600027 ! chorionic stem villus
+relationship: dc-contributor https://orcid.org/0000-0001-6677-8489 ! Aleix Puig-Barbé
+property_value: dcterms-date "2023-12-12T13:42:20Z" xsd:dateTime
+
 [Typedef]
 id: aboral_to
 name: aboral to
@@ -224745,6 +224840,11 @@ id: develops_in
 name: develops in
 xref: RO:0002226
 
+[Typedef]
+id: develops_into
+name: develops into
+xref: RO:0002203
+
 [Typedef]
 id: directly_develops_from
 name: directly develops from