Fixes #3214 NTR urinary bladder regional terms

[aleixpuigb]

Fixes #3214 NTR urinary bladder regional terms

[aleixpuigb]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -simple file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/uberon/uberon-simple.owl
• Version IRI: http://purl.obolibrary.org/obo/uberon/releases/2024-02-29/uberon-simple.owl
• Loaded from: file:/work/src/ontology/../../master/src/ontology/uberon-simple.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/uberon/uberon-simple.owl
• Version IRI: http://purl.obolibrary.org/obo/uberon/releases/2024-02-29/uberon-simple.owl
• Loaded from: file:/work/src/ontology/uberon-simple.owl

Ontology imports

Ontology annotations

anterior wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600046

Added

• anterior wall of urinary bladder contributor 0000-0001-6677-8489

• anterior wall of urinary bladder date "2024-02-29T10:20:11Z"^^dateTime

• anterior wall of urinary bladder label "anterior wall of urinary bladder"

• anterior wall of urinary bladder has_related_synonym "bladder roof"

  • database_cross_reference "doi:10.1007/978-3-642-71368-2_6"

• anterior wall of urinary bladder definition "The most anterior wall of the urinary bladder."

  • database_cross_reference "PMID:30548115"

  • database_cross_reference "doi:10.1007/978-3-642-71368-2_6"

• anterior wall of urinary bladder contributor 0000-0002-4341-3265

• anterior wall of urinary bladder id "UBERON:8600046"

• anterior wall of urinary bladder database_cross_reference "FMA:15903"

• anterior wall of urinary bladder has_obo_namespace "uberon"

• anterior wall of urinary bladder contributor 0000-0001-7655-4833

• anterior wall of urinary bladder contributor X

• anterior wall of urinary bladder has_broad_synonym "anterior wall of bladder"

  • database_cross_reference "PMID:30548115"

• Class: anterior wall of urinary bladder

• anterior wall of urinary bladder SubClassOf wall of urinary bladder

apex of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600048

Added

• apex of urinary bladder contributor 0000-0002-4341-3265

• apex of urinary bladder has_obo_namespace "uberon"

• apex of urinary bladder definition "The anterior angle of the superior surface of the urinary bladder. The apex of urinary bladder is connected to the umbilicus by the urachus in embryos, and by the median umbilical ligament, a remnant of urachus, in adults."

  • database_cross_reference "PMID:31372192"

  • database_cross_reference "doi:10.1016/j.mpsur.2016.04.001"

  • database_cross_reference "doi:10.1016/j.mpsur.2013.04.013"

• apex of urinary bladder contributor 0000-0001-6677-8489

• apex of urinary bladder contributor 0000-0001-7655-4833

• apex of urinary bladder has_broad_synonym "apex of bladder"

  • database_cross_reference "FMA:15914"

• apex of urinary bladder label "apex of urinary bladder"

• apex of urinary bladder contributor X

• apex of urinary bladder has exact synonym "vertex of urinary bladder"

  • database_cross_reference "PMID:35986765"

• apex of urinary bladder database_cross_reference "FMA:15914"

• apex of urinary bladder date "2024-02-29T10:29:33Z"^^dateTime

• apex of urinary bladder id "UBERON:8600048"

• Class: apex of urinary bladder

• apex of urinary bladder SubClassOf part_of some urinary bladder

• apex of urinary bladder SubClassOf connected to some umbilicus

• apex of urinary bladder SubClassOf mesoderm-derived structure

• apex of urinary bladder SubClassOf organ part

dome of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600049

Added

• dome of urinary bladder contributor 0000-0001-6677-8489

• dome of urinary bladder id "UBERON:8600049"

• dome of urinary bladder contributor 0000-0002-4341-3265

• dome of urinary bladder contributor 0000-0001-7655-4833

• dome of urinary bladder definition "The anterosuperior surface of the urinary bladder, with boundaries at the apex and fundus of the urinary bladder."

  • database_cross_reference "doi:10.1016/j.mpsur.2016.04.001"

• dome of urinary bladder contributor X

• dome of urinary bladder has_obo_namespace "uberon"

• dome of urinary bladder label "dome of urinary bladder"

• dome of urinary bladder date "2024-02-29T10:39:28Z"^^dateTime

• dome of urinary bladder database_cross_reference "FMA:265241"

• Class: dome of urinary bladder

• dome of urinary bladder SubClassOf part_of some urinary bladder

• dome of urinary bladder SubClassOf anatomical surface

lateral wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600043

Added

• lateral wall of urinary bladder id "UBERON:8600043"

• lateral wall of urinary bladder definition "A wall of the urinary bladder that is situated on the sides or flanks."

  • database_cross_reference "PMID:30548115"

• lateral wall of urinary bladder contributor X

• lateral wall of urinary bladder contributor 0000-0001-6677-8489

• lateral wall of urinary bladder database_cross_reference "FMA:15905"

• lateral wall of urinary bladder date "2024-02-29T10:09:51Z"^^dateTime

• lateral wall of urinary bladder contributor 0000-0001-7655-4833

• lateral wall of urinary bladder label "lateral wall of urinary bladder"

• lateral wall of urinary bladder contributor 0000-0002-4341-3265

• lateral wall of urinary bladder has_obo_namespace "uberon"

• Class: lateral wall of urinary bladder

• lateral wall of urinary bladder SubClassOf wall of urinary bladder

left lateral wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600044

Added

• left lateral wall of urinary bladder definition "A lateral wall of the urinary bladder that is located on the left side."

  • database_cross_reference "PMID:30548115"

• left lateral wall of urinary bladder contributor X

• left lateral wall of urinary bladder database_cross_reference "FMA:15907"

• left lateral wall of urinary bladder contributor 0000-0001-6677-8489

• left lateral wall of urinary bladder date "2024-02-29T10:12:59Z"^^dateTime

• left lateral wall of urinary bladder id "UBERON:8600044"

• left lateral wall of urinary bladder has_obo_namespace "uberon"

• left lateral wall of urinary bladder has_broad_synonym "left wall of bladder"

  • database_cross_reference "PMID:32233638"

• left lateral wall of urinary bladder has exact synonym "left wall of urinary bladder"

  • database_cross_reference "FMA:15907"

• left lateral wall of urinary bladder label "left lateral wall of urinary bladder"

• left lateral wall of urinary bladder contributor 0000-0001-7655-4833

• left lateral wall of urinary bladder contributor 0000-0002-4341-3265

• Class: left lateral wall of urinary bladder

• left lateral wall of urinary bladder SubClassOf lateral wall of urinary bladder

posterior wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600047

Added

• posterior wall of urinary bladder has_obo_namespace "uberon"

• posterior wall of urinary bladder has_related_synonym "fundus"

  • database_cross_reference "doi:10.1007/978-3-642-71368-2_6"

• posterior wall of urinary bladder label "posterior wall of urinary bladder"

• posterior wall of urinary bladder date "2024-02-29T10:22:52Z"^^dateTime

• posterior wall of urinary bladder contributor 0000-0002-4341-3265

• posterior wall of urinary bladder has_broad_synonym "posterior wall of bladder"

  • database_cross_reference "PMID:30548115"

• posterior wall of urinary bladder contributor 0000-0001-6677-8489

• posterior wall of urinary bladder contributor 0000-0001-7655-4833

• posterior wall of urinary bladder database_cross_reference "FMA:15904"

• posterior wall of urinary bladder definition "The most posterior wall of the urinary bladder."

  • database_cross_reference "PMID:30548115"

• posterior wall of urinary bladder contributor X

• posterior wall of urinary bladder id "UBERON:8600047"

• Class: posterior wall of urinary bladder

• posterior wall of urinary bladder SubClassOf wall of urinary bladder

remnant of urachus http://purl.obolibrary.org/obo/UBERON_0006638

Added

• remnant of urachus SubClassOf connects some apex of urinary bladder

right lateral wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600045

Added

• right lateral wall of urinary bladder label "right lateral wall of urinary bladder"

• right lateral wall of urinary bladder contributor X

• right lateral wall of urinary bladder has_broad_synonym "right wall of bladder"

  • database_cross_reference "PMID:32233638"

• right lateral wall of urinary bladder contributor 0000-0002-4341-3265

• right lateral wall of urinary bladder contributor 0000-0001-7655-4833

• right lateral wall of urinary bladder date "2024-02-29T10:14:47Z"^^dateTime

• right lateral wall of urinary bladder id "UBERON:8600045"

• right lateral wall of urinary bladder definition "A lateral wall of the urinary bladder that is located on the right side."

  • database_cross_reference "PMID:30548115"

• right lateral wall of urinary bladder contributor 0000-0001-6677-8489

• right lateral wall of urinary bladder database_cross_reference "FMA:15906"

• right lateral wall of urinary bladder has exact synonym "right wall of urinary bladder"

  • database_cross_reference "FMA:15906"

• right lateral wall of urinary bladder has_obo_namespace "uberon"

• Class: right lateral wall of urinary bladder

• right lateral wall of urinary bladder SubClassOf lateral wall of urinary bladder

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/uberon/core.owl
• Version IRI: None
• Loaded from: file:/work/src/ontology/../../master/src/ontology/uberon-edit.obo

Right

• Ontology IRI: http://purl.obolibrary.org/obo/uberon/core.owl
• Version IRI: None
• Loaded from: file:/work/src/ontology/uberon-edit.obo

Ontology imports

Ontology annotations

anterior wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600046

Added

• anterior wall of urinary bladder contributor Aleix Puig-Barbé

• anterior wall of urinary bladder date "2024-02-29T10:20:11Z"^^dateTime

• anterior wall of urinary bladder label "anterior wall of urinary bladder"^^string

• anterior wall of urinary bladder has_related_synonym "bladder roof"^^string

  • database_cross_reference "doi:10.1007/978-3-642-71368-2_6"^^string

• anterior wall of urinary bladder definition "The most anterior wall of the urinary bladder."^^string

  • database_cross_reference "PMID:30548115"^^string

  • database_cross_reference "doi:10.1007/978-3-642-71368-2_6"^^string

• anterior wall of urinary bladder contributor 0000-0002-4341-3265

• anterior wall of urinary bladder id "UBERON:8600046"^^string

• anterior wall of urinary bladder database_cross_reference "FMA:15903"^^string

• anterior wall of urinary bladder has_obo_namespace "uberon"^^string

• anterior wall of urinary bladder contributor Ellen Quardokus

• anterior wall of urinary bladder contributor Sanjay Jain

• anterior wall of urinary bladder has_broad_synonym "anterior wall of bladder"^^string

  • database_cross_reference "PMID:30548115"^^string

• Class: anterior wall of urinary bladder

• anterior wall of urinary bladder SubClassOf wall of urinary bladder

apex of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600048

Added

• apex of urinary bladder contributor 0000-0002-4341-3265

• apex of urinary bladder has_obo_namespace "uberon"^^string

• apex of urinary bladder definition "The anterior angle of the superior surface of the urinary bladder. The apex of urinary bladder is connected to the umbilicus by the urachus in embryos, and by the median umbilical ligament, a remnant of urachus, in adults."^^string

  • database_cross_reference "doi:10.1016/j.mpsur.2013.04.013"^^string

  • database_cross_reference "PMID:31372192"^^string

  • database_cross_reference "doi:10.1016/j.mpsur.2016.04.001"^^string

• apex of urinary bladder contributor Aleix Puig-Barbé

• apex of urinary bladder contributor Ellen Quardokus

• apex of urinary bladder has_broad_synonym "apex of bladder"^^string

  • database_cross_reference "FMA:15914"^^string

• apex of urinary bladder label "apex of urinary bladder"^^string

• apex of urinary bladder contributor Sanjay Jain

• apex of urinary bladder has exact synonym "vertex of urinary bladder"^^string

  • database_cross_reference "PMID:35986765"^^string

• apex of urinary bladder database_cross_reference "FMA:15914"^^string

• apex of urinary bladder date "2024-02-29T10:29:33Z"^^dateTime

• apex of urinary bladder id "UBERON:8600048"^^string

• Class: apex of urinary bladder

• apex of urinary bladder SubClassOf part_of some urinary bladder

• apex of urinary bladder SubClassOf organ part

• apex of urinary bladder SubClassOf connected to some umbilicus

dome of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600049

Added

• dome of urinary bladder contributor Aleix Puig-Barbé

• dome of urinary bladder id "UBERON:8600049"^^string

• dome of urinary bladder contributor 0000-0002-4341-3265

• dome of urinary bladder contributor Ellen Quardokus

• dome of urinary bladder definition "The anterosuperior surface of the urinary bladder, with boundaries at the apex and fundus of the urinary bladder."^^string

  • database_cross_reference "doi:10.1016/j.mpsur.2016.04.001"^^string

• dome of urinary bladder contributor Sanjay Jain

• dome of urinary bladder has_obo_namespace "uberon"^^string

• dome of urinary bladder label "dome of urinary bladder"^^string

• dome of urinary bladder date "2024-02-29T10:39:28Z"^^dateTime

• dome of urinary bladder database_cross_reference "FMA:265241"^^string

• Class: dome of urinary bladder

• dome of urinary bladder SubClassOf part_of some urinary bladder

• dome of urinary bladder SubClassOf anatomical surface

lateral wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600043

Added

• lateral wall of urinary bladder id "UBERON:8600043"^^string

• lateral wall of urinary bladder definition "A wall of the urinary bladder that is situated on the sides or flanks."^^string

  • database_cross_reference "PMID:30548115"^^string

• lateral wall of urinary bladder contributor Sanjay Jain

• lateral wall of urinary bladder contributor Aleix Puig-Barbé

• lateral wall of urinary bladder database_cross_reference "FMA:15905"^^string

• lateral wall of urinary bladder date "2024-02-29T10:09:51Z"^^dateTime

• lateral wall of urinary bladder contributor Ellen Quardokus

• lateral wall of urinary bladder label "lateral wall of urinary bladder"^^string

• lateral wall of urinary bladder contributor 0000-0002-4341-3265

• lateral wall of urinary bladder has_obo_namespace "uberon"^^string

• Class: lateral wall of urinary bladder

• lateral wall of urinary bladder SubClassOf wall of urinary bladder

left lateral wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600044

Added

• left lateral wall of urinary bladder definition "A lateral wall of the urinary bladder that is located on the left side."^^string

  • database_cross_reference "PMID:30548115"^^string

• left lateral wall of urinary bladder contributor Sanjay Jain

• left lateral wall of urinary bladder database_cross_reference "FMA:15907"^^string

• left lateral wall of urinary bladder contributor Aleix Puig-Barbé

• left lateral wall of urinary bladder date "2024-02-29T10:12:59Z"^^dateTime

• left lateral wall of urinary bladder id "UBERON:8600044"^^string

• left lateral wall of urinary bladder has_obo_namespace "uberon"^^string

• left lateral wall of urinary bladder has_broad_synonym "left wall of bladder"^^string

  • database_cross_reference "PMID:32233638"^^string

• left lateral wall of urinary bladder has exact synonym "left wall of urinary bladder"^^string

  • database_cross_reference "FMA:15907"^^string

• left lateral wall of urinary bladder label "left lateral wall of urinary bladder"^^string

• left lateral wall of urinary bladder contributor Ellen Quardokus

• left lateral wall of urinary bladder contributor 0000-0002-4341-3265

• Class: left lateral wall of urinary bladder

• left lateral wall of urinary bladder SubClassOf lateral wall of urinary bladder

posterior wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600047

Added

• posterior wall of urinary bladder has_obo_namespace "uberon"^^string

• posterior wall of urinary bladder has_related_synonym "fundus"^^string

  • database_cross_reference "doi:10.1007/978-3-642-71368-2_6"^^string

• posterior wall of urinary bladder label "posterior wall of urinary bladder"^^string

• posterior wall of urinary bladder date "2024-02-29T10:22:52Z"^^dateTime

• posterior wall of urinary bladder contributor 0000-0002-4341-3265

• posterior wall of urinary bladder has_broad_synonym "posterior wall of bladder"^^string

  • database_cross_reference "PMID:30548115"^^string

• posterior wall of urinary bladder contributor Aleix Puig-Barbé

• posterior wall of urinary bladder contributor Ellen Quardokus

• posterior wall of urinary bladder database_cross_reference "FMA:15904"^^string

• posterior wall of urinary bladder definition "The most posterior wall of the urinary bladder."^^string

  • database_cross_reference "PMID:30548115"^^string

• posterior wall of urinary bladder contributor Sanjay Jain

• posterior wall of urinary bladder id "UBERON:8600047"^^string

• Class: posterior wall of urinary bladder

• posterior wall of urinary bladder SubClassOf wall of urinary bladder

remnant of urachus http://purl.obolibrary.org/obo/UBERON_0006638

Added

• remnant of urachus SubClassOf connects some apex of urinary bladder

right lateral wall of urinary bladder http://purl.obolibrary.org/obo/UBERON_8600045

Added

• right lateral wall of urinary bladder label "right lateral wall of urinary bladder"^^string

• right lateral wall of urinary bladder contributor Sanjay Jain

• right lateral wall of urinary bladder has_broad_synonym "right wall of bladder"^^string

  • database_cross_reference "PMID:32233638"^^string

• right lateral wall of urinary bladder contributor 0000-0002-4341-3265

• right lateral wall of urinary bladder contributor Ellen Quardokus

• right lateral wall of urinary bladder date "2024-02-29T10:14:47Z"^^dateTime

• right lateral wall of urinary bladder id "UBERON:8600045"^^string

• right lateral wall of urinary bladder definition "A lateral wall of the urinary bladder that is located on the right side."^^string

  • database_cross_reference "PMID:30548115"^^string

• right lateral wall of urinary bladder contributor Aleix Puig-Barbé

• right lateral wall of urinary bladder database_cross_reference "FMA:15906"^^string

• right lateral wall of urinary bladder has exact synonym "right wall of urinary bladder"^^string

  • database_cross_reference "FMA:15906"^^string

• right lateral wall of urinary bladder has_obo_namespace "uberon"^^string

• Class: right lateral wall of urinary bladder

• right lateral wall of urinary bladder SubClassOf lateral wall of urinary bladder