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Add abnormally dilated anatomical entity pattern
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This commit intends to add a new DOSCP pattern
`abnormallyDilatedAnatomicalEntity.yaml`

If applied, this commit will fix #787.
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rays22 committed Feb 22, 2022
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56 changes: 56 additions & 0 deletions src/patterns/dosdp-dev/abnormallyDilatedAnatomicalEntity.yaml
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---
pattern_name: abnormallyDilatedAnatomicalEntity

pattern_iri: http://purl.obolibrary.org/obo/oba/patterns/abnormallyDilatedAnatomicalEntity.yaml

description: 'An abnormally dilated anatomical entity, for example, an abnormally dilated cardiac ventricle.'

examples:
- http://purl.obolibrary.org/obo/HP_0010955
- http://purl.obolibrary.org/obo/XPO_0115624
- http://purl.obolibrary.org/obo/MP_0001123

contributors:
- https://orcid.org/0000-0001-8314-2140

classes:
abnormal: PATO:0000460
anatomical_entity: UBERON:0001062
dilated: PATO:0001571

relations:
characteristic_of: RO:0000052
has_modifier: RO:0002573
has_part: BFO:0000051

annotationProperties:
exact_synonym: oio:hasExactSynonym

vars:
anatomical_entity: "'anatomical_entity'"

name:
text: "abnormally dilated %s"
vars:
- anatomical_entity

annotations:
- annotationProperty: exact_synonym
text: "abnormal %s dilation"
vars:
- anatomical_entity

- annotationProperty: exact_synonym
text: "dilated %s"
vars:
- anatomical_entity

def:
text: "Abnormal dilation of %s."
vars:
- anatomical_entity

equivalentTo:
text: "'has_part' some ('dilated' and('characteristic_of' some %s) and ('has_modifier' some 'abnormal')"
vars:
- anatomical_entity

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