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Improve pattern template based on feedback
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If applied, this commit will fix #834.
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rays22 committed Jul 11, 2022
1 parent 2c9c051 commit ef1dd6b
Showing 1 changed file with 9 additions and 4 deletions.
13 changes: 9 additions & 4 deletions src/patterns/dosdp-dev/exsertedAnatomicalEntity.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,9 @@ pattern_name: exsertedAnatomicalEntity

pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/exsertedAnatomicalEntity.yaml

description: 'Use this phenotype pattern when an anatomical entity is abnormally protruding or projecting from the body. These anatomical entities may be described as being prolapsed, protuberant or sticking out.'
description: 'Use this phenotype pattern when an anatomical entity is
abnormally protruding or projecting from the body. These anatomical
entities may be described as being prolapsed, protuberant or sticking out.'

# examples:
# - http://purl.obolibrary.org/obo/ZP_0016742 # pectoral fin exserted, abnormal
Expand All @@ -13,6 +15,9 @@ description: 'Use this phenotype pattern when an anatomical entity is abnormally

contributors:
- https://orcid.org/0000-0001-8314-2140 # Ray Stefancsik
- https://orcid.org/0000-0002-7356-1779 # Nicolas Matentzoglu
- https://orcid.org/0000-0003-4606-0597 # Susan Bello
- https://orcid.org/0000-0002-6490-7723 # Anna V. Anagnostopoulos

classes:
exserted: PATO:0000623
Expand All @@ -26,7 +31,7 @@ relations:

annotationProperties:
exact_synonym: oio:hasExactSynonym
related_synonym: oio:hasRelatedSynonym
narrow_synonym: oio:hasNarrowSynonym

vars:
anatomical_entity: "'anatomical_entity'"
Expand All @@ -42,12 +47,12 @@ annotations:
vars:
- anatomical_entity

- annotationProperty: related_synonym
- annotationProperty: narrow_synonym
text: "%s prolapse"
vars:
- anatomical_entity

- annotationProperty: related_synonym
- annotationProperty: narrow_synonym
text: "prolapsed %s"
vars:
- anatomical_entity
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