Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

WIP: collected during relation #759

Merged
merged 11 commits into from
Aug 12, 2024
Merged

WIP: collected during relation #759

Changes from 9 commits
Commits
Show all changes
11 commits
Select commit Hold shift + click to select a range
e8696f2
collected during relation
ddooley Oct 2, 2023
b17d837
definition tweak.
ddooley Jan 22, 2024
90ba7bf
Merge branch 'master' into issue-#598-part2
anitacaron Jan 22, 2024
4ca19e7
update `orcidio_import`
anitacaron Jan 22, 2024
69b23d7
Merge branch 'master' into issue-#598-part2
anitacaron Feb 9, 2024
1380b77
normalize ro-edit file
anitacaron Feb 9, 2024
0f6cab0
Merge branch 'master' into issue-#598-part2
anitacaron Mar 28, 2024
f8f8584
Merge branch 'master' into issue-#598-part2
ddooley May 8, 2024
1c2ba04
collected during relation defn simplification
ddooley May 8, 2024
f6b503b
remove misplaced pato term from ro-edit
anitacaron Jul 15, 2024
4fcbc5b
Merge branch 'master' into issue-#598-part2
cmungall Aug 12, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
15 changes: 14 additions & 1 deletion src/ontology/ro-edit.owl
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -44,6 +44,7 @@ Declaration(Class(obo:BFO_0000031))
Declaration(Class(obo:CHEBI_50906))
Declaration(Class(obo:COB_0001000))
Declaration(Class(obo:OGMS_0000031))
Declaration(Class(obo:PATO_0001470))
anitacaron marked this conversation as resolved.
Show resolved Hide resolved
Declaration(Class(obo:RO_0002310))
Declaration(Class(obo:RO_0002532))
Declaration(Class(obo:RO_0002533))
Expand Down Expand Up @@ -584,6 +585,7 @@ Declaration(ObjectProperty(obo:RO_0017005))
Declaration(ObjectProperty(obo:RO_0017006))
Declaration(ObjectProperty(obo:RO_0017008))
Declaration(ObjectProperty(obo:RO_0017009))
Declaration(ObjectProperty(obo:RO_0017502))
Declaration(ObjectProperty(obo:RO_0018001))
Declaration(ObjectProperty(obo:RO_0018002))
Declaration(ObjectProperty(obo:RO_0018003))
Expand Down Expand Up @@ -6645,6 +6647,17 @@ AnnotationAssertion(oboInOwl:creation_date obo:RO_0017009 "2023-03-29T17:06:06Z"
AnnotationAssertion(oboInOwl:inSubset obo:RO_0017009 obo:RO_0002259)
AnnotationAssertion(rdfs:label obo:RO_0017009 "is owned by"@en)

# Object Property: obo:RO_0017502 (collected during)

AnnotationAssertion(obo:IAO_0000112 obo:RO_0017502 "A thorax specimen was collected during the larval stage."@en)
AnnotationAssertion(obo:IAO_0000112 obo:RO_0017502 "An oyster was collected during low tide."@en)
AnnotationAssertion(obo:IAO_0000115 obo:RO_0017502 "A relation between a material entity and an occurrent in which the material entity is collected during the existence of the occurrent."@en)
AnnotationAssertion(terms:contributor obo:RO_0017502 <https://orcid.org/0000-0002-8844-9165>)
AnnotationAssertion(terms:date obo:RO_0017502 "2023-09-13T04:12:32Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label obo:RO_0017502 "collected during"@en)
ObjectPropertyDomain(obo:RO_0017502 obo:BFO_0000040)
ObjectPropertyRange(obo:RO_0017502 obo:BFO_0000003)
ddooley marked this conversation as resolved.
Show resolved Hide resolved

# Object Property: obo:RO_0018001 (is myristoyltransferase activity)

AnnotationAssertion(obo:IAO_0000115 obo:RO_0018001 "Helper relation for OWL definition of RO:0018002 myristoylates")
Expand Down Expand Up @@ -7275,4 +7288,4 @@ AnnotationAssertion(oboInOwl:inSubset obo:RO_0002086 subsets:ro-eco)
AnnotationAssertion(oboInOwl:inSubset obo:RO_0002089 subsets:ro-eco)
AnnotationAssertion(oboInOwl:inSubset obo:RO_0002093 subsets:ro-eco)
AnnotationAssertion(Annotation(rdfs:comment "This is an experimental annotation") obo:IAO_0000589 rdfs:isDefinedBy "is defined by")
)
)
Loading