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@ocbe-uio

Oslo Centre for Biostatistics and Epidemiology

This is where we host some of the scientific software we produce at OCBE, a joint center between the University of Oslo and the Oslo University Hospital.

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  1. BayesMallows BayesMallows Public

    R-package for Bayesian preference learning with the Mallows rank model.

    R 21 9

  2. teaching_mf9130e teaching_mf9130e Public

    Course material for MF9130E

    R 15 10

  3. DIscBIO DIscBIO Public

    A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics

    Jupyter Notebook 12 5

  4. survomics survomics Public

    Tutorial on survival modeling with omics data

    TeX 11 1

  5. rBAPS rBAPS Public

    R implementation of the BAPS software for Bayesian Analysis of Population Structure

    R 10 4

  6. trajpy trajpy Public

    Trajpy - empowering feature engineering for trajectory analysis across domains.

    Python 7 2

Repositories

Showing 10 of 55 repositories
  • rBAPS Public

    R implementation of the BAPS software for Bayesian Analysis of Population Structure

    ocbe-uio/rBAPS’s past year of commit activity
    R 10 GPL-3.0 4 10 (2 issues need help) 0 Updated Dec 12, 2024
  • public-slides Public

    A repository for slides presented to the public or publicly-available slides

    ocbe-uio/public-slides’s past year of commit activity
    HTML 1 CC-BY-SA-4.0 0 0 0 Updated Dec 11, 2024
  • workshop-stat-highdim Public

    Workshop website for Statistical Principles in Machine Learning for Small Biomedical Data

    ocbe-uio/workshop-stat-highdim’s past year of commit activity
    R 1 MIT 2 0 0 Updated Dec 9, 2024
  • norkost_doc Public

    Documentation for Norkost x SPADE

    ocbe-uio/norkost_doc’s past year of commit activity
    R 0 MIT 0 0 0 Updated Dec 5, 2024
  • noreden_doc Public

    Documentation for NorEden project

    ocbe-uio/noreden_doc’s past year of commit activity
    R 0 0 0 0 Updated Dec 5, 2024
  • kids-chd Public

    Congenital Heart Disease among Children

    ocbe-uio/kids-chd’s past year of commit activity
    R 0 GPL-3.0 0 7 0 Updated Nov 22, 2024
  • BayesSurvive Public

    Bayesian survival models for high-dimensional data

    ocbe-uio/BayesSurvive’s past year of commit activity
    R 1 GPL-3.0 1 3 0 Updated Oct 23, 2024
  • napic Public

    R code for the NAPiC trial analyses

    ocbe-uio/napic’s past year of commit activity
    R 0 MIT 0 0 0 Updated Oct 17, 2024
  • burst Public

    Code for the BURST trial

    ocbe-uio/burst’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Oct 17, 2024
  • pyPhenoPop Public

    Phenotypic deconvolution in heterogeneous cancer cell populations using drug screen data

    ocbe-uio/pyPhenoPop’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Oct 17, 2024
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