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0.11.0-rc.5

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@lbeckman314 lbeckman314 released this 02 Mar 01:36
· 21 commits to master since this release
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Overview

This release adds support for version 1.1 of the TES schema as part of the GA4GH community.

Getting Started

See step by step guides on using Funnel to run and track tasks on the documentation page at https://ohsu-comp-bio.github.io/funnel

Installing

Homebrew

Funnel is available on macOS through Homebrew:

brew tap ohsu-comp-bio/formula
brew install funnel

Install Script

Alternatively, Funnel may be installed with the installer script. By default it installs the latest release into the $HOME/.local/bin directory:

/bin/bash -c "$(curl -fsSL https://github.com/ohsu-comp-bio/funnel/releases/download/0.11.0-rc.5/install.sh)" -- 0.11.0-rc.5

What's Changed

  • TESv1.1 support
  • Added initial Nextflow support
  • Updated Homebrew installation and Docker images

Credits

Developed by the Ellrott Lab at Oregon Health & Science University.

Development was lead by Kyle Ellrott (@kellrott) with contributions from Alex Kanitz (@uniqueg), Adam Struck (@adamstruck), Adam Novak (@adamnovak), and Liam Beckman (@lbeckman314) with Data Analysis and HPC guidance by Jordan Lee (@jordan2lee). Special thanks to Lakshya Garg (@LakiG) and Alex for their work on the TES Compliance Suite.

Changelog

  • PR #761 Add Nextflow (nf-canary) tests to Funnel
  • PR #724 Create dependabot.yml

Full Changelog: 0.10.1...0.11.0