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adjust layout/config certificates
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jburel committed May 11, 2020
1 parent 93daf9f commit 2ec6207
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7 changes: 5 additions & 2 deletions omero/sysadmins/unix/server-centos7-ice36.rst
Original file line number Diff line number Diff line change
Expand Up @@ -78,7 +78,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_centos7.sh
:start-after: #start-step03bis
Expand All @@ -102,6 +102,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -111,7 +114,7 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_centos7.sh
:start-after: #end-copy-omeroscript
Expand Down
15 changes: 7 additions & 8 deletions omero/sysadmins/unix/server-centos8-ice36.rst
Original file line number Diff line number Diff line change
Expand Up @@ -78,7 +78,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_centos8.sh
:start-after: #start-step03bis
Expand All @@ -102,6 +102,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -111,22 +114,18 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_centos8.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
the version installed on Debian 10.
Weaker ciphers like ADH are disabled by default in OpenSSL 1.1+,
the version installed on CentOS 8.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
the OMERO.web client or the CLI.
The parameter ``@SECLEVEL=0``, enabling the weaker ciphers, needs to be
set in order to allow connection.

.. literalinclude:: walkthrough/walkthrough_centos8.sh
:start-after: #start-seclevel
Expand Down
12 changes: 6 additions & 6 deletions omero/sysadmins/unix/server-debian10-ice36.rst
Original file line number Diff line number Diff line change
Expand Up @@ -79,7 +79,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding, PyTables_ and ``omero-certificates`` using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_debian10.sh
:start-after: #start-step03bis
Expand All @@ -103,6 +103,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.**

The variable :envvar:`OMERODIR` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -112,16 +115,13 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_debian10.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
Weaker ciphers like ADH are disabled by default in OpenSSL 1.1+,
the version installed on Debian 10.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
Expand Down
10 changes: 5 additions & 5 deletions omero/sysadmins/unix/server-debian9-ice36.rst
Original file line number Diff line number Diff line change
Expand Up @@ -92,7 +92,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding, PyTables_ and ``omero-certificates`` using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_debian9.sh
:start-after: #start-step03bis
Expand All @@ -116,6 +116,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -125,15 +128,12 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_debian9.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
the version installed on Debian 9.
This means that it is not possible to connect to an OMERO.server
Expand Down
7 changes: 5 additions & 2 deletions omero/sysadmins/unix/server-ubuntu1604-ice36.rst
Original file line number Diff line number Diff line change
Expand Up @@ -78,7 +78,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding and PyTables_ using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_ubuntu1604.sh
:start-after: #start-step03bis
Expand All @@ -102,6 +102,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -111,7 +114,7 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_ubuntu1604.sh
:start-after: #end-copy-omeroscript
Expand Down
12 changes: 6 additions & 6 deletions omero/sysadmins/unix/server-ubuntu1804-ice36.rst
Original file line number Diff line number Diff line change
Expand Up @@ -84,7 +84,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding, PyTables_ and ``omero-certificates`` using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_ubuntu1804.sh
:start-after: #start-step03bis
Expand All @@ -108,6 +108,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -117,16 +120,13 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_ubuntu1804.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
Weaker ciphers like ADH are disabled by default in OpenSSL 1.1+,
the version installed on Ubuntu 18.04.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
Expand Down
12 changes: 6 additions & 6 deletions omero/sysadmins/unix/server-ubuntu2004-ice36.rst
Original file line number Diff line number Diff line change
Expand Up @@ -84,7 +84,7 @@ Installing OMERO.server

**The following step is run as root.**

We recommend to create a virtual environment and install the Ice Python binding, PyTables_ and ``omero-certificates`` using ``pip``:
We recommend to create a virtual environment and install the Ice Python binding and the dependencies required by the server using ``pip``:

.. literalinclude:: walkthrough/walkthrough_ubuntu2004.sh
:start-after: #start-step03bis
Expand All @@ -108,6 +108,9 @@ Change the ownership of the OMERO.server directory and create a symlink:
:start-after: #end-release-ice36
:end-before: #end-step04-pre

Configuring OMERO.server
------------------------

**The following steps are run as the omero-server system user.** (``su - omero-server``)

The variable ``OMERODIR`` set in :download:`settings.env <walkthrough/settings.env>` above **must** point to the location where OMERO.server is installed.
Expand All @@ -117,16 +120,13 @@ Note that this script requires the same environment variables that were set
earlier in `settings.env`, so you may need to copy and/or source this file as
the omero user.

Configure the server:
Configure the database and the location of the data directory:

.. literalinclude:: walkthrough/walkthrough_ubuntu2004.sh
:start-after: #end-copy-omeroscript
:end-before: #end-step04

Patching OMERO.server
---------------------

Weaker ciphers like ADH are disabled by default in OpenSSL 1.1.0,
Weaker ciphers like ADH are disabled by default in OpenSSL 1.1+,
the version installed on Ubuntu 20.04.
This means that it is not possible to connect to an OMERO.server
using any OMERO clients e.g. the Java Desktop client,
Expand Down

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