Merge pull request #2536 from opencb/TASK-7225

TASK-7225 - Warning events messages still take up a large part of the screen in Variant Browser
opencb · Dec 20, 2024 · 3acb910 · 3acb910
2 parents bdccb74 + 3f8ee12
commit 3acb910
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diff --git a/...rg/opencb/opencga/storage/core/variant/query/projection/VariantQueryProjectionParser.java b/...rg/opencb/opencga/storage/core/variant/query/projection/VariantQueryProjectionParser.java
@@ -154,7 +154,7 @@ public VariantQueryProjection parseVariantQueryProjection(Query query, QueryOpti
                             message += " The statistics have been calculated with " + invalidStatsNumSamples + " samples, "
                                     + "while the total number of samples in the cohort is " + numSampmles + ".";
                         }
-                        message += " To display updated statistics, please execute variant-stats-index.";
+                        message += " To display updated statistics, please contact your Organization / Study Administrator.";
                         events.add(new Event(Event.Type.WARNING, message));
                     } else if (status == TaskMetadata.Status.RUNNING) {
                         String message = "Please note that the Cohort Stats for "

diff --git a/...test/java/org/opencb/opencga/storage/core/variant/stats/VariantStatisticsManagerTest.java b/...test/java/org/opencb/opencga/storage/core/variant/stats/VariantStatisticsManagerTest.java
@@ -169,7 +169,7 @@ public void queryInvalidStats() throws Exception {
         assertEquals(1, result.getEvents().size());
         assertEquals("Please note that the Cohort Stats for '1000g:cohort2' are currently outdated." +
                 " The statistics have been calculated with 2 samples, while the total number of samples in the cohort is 4." +
-                " To display updated statistics, please execute variant-stats-index.", result.getEvents().get(0).getMessage());
+                " To display updated statistics, please contact your Organization / Study Administrator.", result.getEvents().get(0).getMessage());
 
         VariantStorageEngine engineMock = Mockito.spy(variantStorageEngine);
         VariantStatisticsManager statsManagerMock = Mockito.spy(variantStorageEngine.newVariantStatisticsManager());