Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

TASK-7225 - Warning events messages still take up a large part of the screen in Variant Browser #2536

Merged
merged 1 commit into from
Dec 20, 2024
Merged

TASK-7225 - Warning events messages still take up a large part of the screen in Variant Browser #2536

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion ...rg/opencb/opencga/storage/core/variant/query/projection/VariantQueryProjectionParser.java
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -154,7 +154,7 @@ public VariantQueryProjection parseVariantQueryProjection(Query query, QueryOpti
message += " The statistics have been calculated with " + invalidStatsNumSamples + " samples, "
+ "while the total number of samples in the cohort is " + numSampmles + ".";
}
message += " To display updated statistics, please execute variant-stats-index.";
message += " To display updated statistics, please contact your Organization / Study Administrator.";
events.add(new Event(Event.Type.WARNING, message));
} else if (status == TaskMetadata.Status.RUNNING) {
String message = "Please note that the Cohort Stats for "
Expand Down
2 changes: 1 addition & 1 deletion ...test/java/org/opencb/opencga/storage/core/variant/stats/VariantStatisticsManagerTest.java
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -169,7 +169,7 @@ public void queryInvalidStats() throws Exception {
assertEquals(1, result.getEvents().size());
assertEquals("Please note that the Cohort Stats for '1000g:cohort2' are currently outdated." +
" The statistics have been calculated with 2 samples, while the total number of samples in the cohort is 4." +
" To display updated statistics, please execute variant-stats-index.", result.getEvents().get(0).getMessage());
" To display updated statistics, please contact your Organization / Study Administrator.", result.getEvents().get(0).getMessage());

VariantStorageEngine engineMock = Mockito.spy(variantStorageEngine);
VariantStatisticsManager statsManagerMock = Mockito.spy(variantStorageEngine.newVariantStatisticsManager());
Expand Down
Loading