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manifest: Explicitly base manifest.layers on an empty directory
And point out that layer authors interested in the ownership and other attributes of the unpacked root directory should explicitly set an entry for it. I've used "match"” instead of "be" to allow folks to apply via a union filesystem or whatever. As long as the finished product is right, compliance testers and users should be satisfied. Signed-off-by: W. Trevor King <wking@tremily.us>
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