Improve workflows (#353)

* Improvements

* update package tester

* Update changelog

* Split index of contents from demos

* Enable more

* More fixes

* Fix

* fixes

* Fixes

* Fixes

* Fixes

* cleanup

* Install only zip of entire toolkit and fixes to package tester

* Restore previous approach

* Force local use

* Preserve artifact on failures to allow rerun

* Revert

* More

* Fixes

* Minor

* Fixes

* Fixes

* Fixes

* Undo wrong changes

* Fixes

* Fix formatting

* Fixes

* Fixes

* Test

* Test

* Fixes

* Fixes

* fixes

* Split skeleton based action recognition tests

* Fixes

* Fixes

* Fixes

* Fixes

* Fix

* Fix script

* Fix post-install

* Fix typo

* Add missing tool dependency

* Fix multimodal

* Enfore protobuf to avoid issues with onnx and tensorboard

* Fix costgcn

* Fix sources

* Debug

* Minor

* Revert "Minor"

This reverts commit 7366bf5.

* Revert "Debug"

This reverts commit 7f221d7.

* Debug

* debug

* Update test_object_detection_3d.py

* Update test_object_detection_3d.py

* Update test_object_detection_3d.py

* Debug

* Debug

* Debug

* Restore

* Fixes

* Refactor tools with ROS deps

* Fix

* Test

* Fix

* Revert "Fix"

This reverts commit c74f766.

* Revert "Test"

This reverts commit 596f118.

* Revert "Fix"

This reverts commit d182ded.

* Revert "Refactor tools with ROS deps"

This reverts commit c74566d.

* Rework

* Fixes

* Fixes

* Fixes

* Fixes

* Fixes

* Restore

* Test fix

* Test fix

* Update tests_suite.yml

* Test

* Fixes

* Fixes

* Cleanup

* Fixes

* Fixes

* Test

* Update setup_end_to_end_planning.sh

* Test old procedure

* Permissions

* Test

* Test

* Test

* Test

* Fix missing dep

* Test

* Test

* Revert attempts

* Fix

* Fix

* Fix

* Fix

* Finalize

* Update src/opendr/perception/multimodal_human_centric/dependencies.ini

Co-authored-by: Kostas Tsampazis <27914645+tsampazk@users.noreply.github.com>

* Update src/opendr/perception/object_detection_3d/voxel_object_detection_3d/dependencies.ini

Co-authored-by: Kostas Tsampazis <27914645+tsampazk@users.noreply.github.com>

* Remove wheels for single demo, mobile manip. and end2end planning

* Testing

Dirty commit, comments needs to removed.

* Remove make command for retinaface

* Clean workflow

Co-authored-by: Kostas Tsampazis <27914645+tsampazk@users.noreply.github.com>
Co-authored-by: Nikolaos Passalis <passalis@users.noreply.github.com>

.github/workflows/test_packages.yml

@@ -30,11 +30,17 @@ jobs:
           - perception/face_recognition
           - perception/heart_anomaly_detection
           - perception/multimodal_human_centric
-          - perception/object_tracking_2d
           - perception/pose_estimation
+          - perception/fall_detection
           - perception/speech_recognition
-          - perception/skeleton_based_action_recognition
+          - perception/skeleton_based_action_recognition/costgcn
+          - perception/skeleton_based_action_recognition/pstgcn
+          - perception/skeleton_based_action_recognition/stbln
+          - perception/skeleton_based_action_recognition/stgcn
+          - perception/skeleton_based_action_recognition/tagcn
           - perception/semantic_segmentation
+          - perception/object_tracking_2d
+          # - perception/object_tracking_3d # passes, but disabled due to free() crash
           - perception/object_detection_2d/centernet
           - perception/object_detection_2d/detr
           - perception/object_detection_2d/gem
@@ -44,29 +50,30 @@ jobs:
           - perception/object_detection_2d/yolov5
           - perception/object_detection_2d/retinaface
           - perception/object_detection_2d/nms
+          # - perception/object_detection_3d # passes, but disabled due to free() crash
           - perception/facial_expression_recognition
-          - perception/object_detection_3d
-          # - control/mobile_manipulation
-          # - simulation/human_model_generation
-          # - control/single_demo_grasp
-          - perception/object_tracking_3d
+          - simulation/human_model_generation
+          #- control/mobile_manipulation
+          #- control/single_demo_grasp
+          #- planning/end_to_end_planning
     runs-on: ${{ matrix.os }}
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v3
     - name: Set up Python 3.8
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v4
       with:
         python-version: 3.8
-    - name: Test Wheel
+    - name: Test Wheel Separately
       run: |
         export DISABLE_BCOLZ_AVX2=true
-        sudo apt -y install python3.8-venv libfreetype6-dev git build-essential cmake python3-dev wget libopenblas-dev libsndfile1 libboost-dev python3-dev
+        sudo apt -y install python3.8-venv libfreetype6-dev git build-essential cmake python3-dev wget libopenblas-dev libsndfile1 libboost-dev libeigen3-dev
         python3 -m venv venv
         source venv/bin/activate
-        wget https://raw.githubusercontent.com/opendr-eu/opendr/master/dependencies/pip_requirements.txt
-        cat pip_requirements.txt | xargs -n 1 -L 1 pip install
-        pip install opendr-toolkit
-        python -m unittest discover -s tests/sources/tools/${{ matrix.package }}
+        python3 -m pip install --upgrade pip
+        python3 -m pip install wheel
+        python3 -m pip install opendr-toolkit
+        # run the test
+        python3 -m unittest discover -s tests/sources/tools/${{ matrix.package }}
   test-docker:
     if: ${{ contains(github.event.pull_request.labels.*.name, 'test packages') || github.event_name == 'schedule' }}
     strategy:
@@ -80,11 +87,17 @@ jobs:
           - perception/face_recognition
           - perception/heart_anomaly_detection
           - perception/multimodal_human_centric
-          - perception/object_tracking_2d
           - perception/pose_estimation
+          - perception/fall_detection
           - perception/speech_recognition
-          - perception/skeleton_based_action_recognition
+          - perception/skeleton_based_action_recognition/costgcn
+          - perception/skeleton_based_action_recognition/pstgcn
+          - perception/skeleton_based_action_recognition/stbln
+          - perception/skeleton_based_action_recognition/stgcn
+          - perception/skeleton_based_action_recognition/tagcn
           - perception/semantic_segmentation
+          - perception/object_tracking_2d
+          # - perception/object_tracking_3d # passes, but disabled due to free() crash
           - perception/object_detection_2d/centernet
           - perception/object_detection_2d/detr
           - perception/object_detection_2d/gem
@@ -94,20 +107,20 @@ jobs:
           - perception/object_detection_2d/yolov5
           - perception/object_detection_2d/retinaface
           - perception/object_detection_2d/nms
+          # - perception/object_detection_3d # passes, but disabled due to free() crash
           - perception/facial_expression_recognition
-          - perception/object_detection_3d
-          - control/mobile_manipulation
           - simulation/human_model_generation
+          - control/mobile_manipulation
           - control/single_demo_grasp
-          - perception/object_tracking_3d
+          - planning/end_to_end_planning
     runs-on: ${{ matrix.os }}
     steps:
     - name: Set up Python 3.8
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v4
       with:
         python-version: 3.8
     - name: Test Docker
       run: |
-        docker run --name toolkit -i opendr/opendr-toolkit:cpu_v1.1.1 bash
+        docker run --name toolkit -i opendr/opendr-toolkit:cpu_v2.0.0 bash
         docker start toolkit
-        docker exec -i toolkit bash -c "source bin/activate.sh && source tests/sources/tools/control/mobile_manipulation/run_ros.sh && python -m unittest discover -s tests/sources/tools/${{ matrix.package }}"
+        docker exec -i toolkit bash -c "source bin/activate.sh && source tests/sources/tools/control/mobile_manipulation/run_ros.sh && python3 -m unittest discover -s tests/sources/tools/${{ matrix.package }}"