import-random-patients synthea command failing on easy-development docker

[adunsulag]

Attempted to run the synthea import-random-patients command and I'm getting failures on the APK installs.

Here is the command:

 docker exec -i $(docker ps | grep _openemr | cut -f 1 -d " ") sh -c '/root/devtools import-random-patients 600'

Here is the output I'm getting

Setting up for following number of random patients (each patient will take several seconds): 600
Development mode: true
Setting up synthea first
fetch https://dl-cdn.alpinelinux.org/alpine/v3.15/main/x86_64/APKINDEX.tar.gz
ERROR: https://dl-cdn.alpinelinux.org/alpine/v3.15/main: temporary error (try again later)
fetch https://dl-cdn.alpinelinux.org/alpine/v3.15/community/x86_64/APKINDEX.tar.gz
ERROR: https://dl-cdn.alpinelinux.org/alpine/v3.15/community: temporary error (try again later)
v3.15.4-164-g5ff351d78e [https://dl-cdn.alpinelinux.org/alpine/v3.15/main]
v3.15.4-165-gf31a770f5f [https://dl-cdn.alpinelinux.org/alpine/v3.15/community]
2 errors; 15907 distinct packages available
fetch https://dl-cdn.alpinelinux.org/alpine/v3.15/main/x86_64/APKINDEX.tar.gz
ERROR: https://dl-cdn.alpinelinux.org/alpine/v3.15/main: temporary error (try again later)
fetch https://dl-cdn.alpinelinux.org/alpine/v3.15/community/x86_64/APKINDEX.tar.gz
ERROR: https://dl-cdn.alpinelinux.org/alpine/v3.15/community: temporary error (try again later)
(1/16) Installing encodings (1.0.5-r0)
ERROR: encodings-1.0.5-r0: temporary error (try again later)
(2/16) Installing ttf-dejavu (2.37-r1)
ERROR: ttf-dejavu-2.37-r1: temporary error (try again later)
(3/16) Installing giflib (5.2.1-r0)
ERROR: giflib-5.2.1-r0: temporary error (try again later)
(4/16) Installing openjdk8-jre-lib (8.322.06-r0)
(5/16) Installing java-common (0.5-r0)
ERROR: openjdk8-jre-lib-8.322.06-r0: temporary error (try again later)
ERROR: java-common-0.5-r0: temporary error (try again later)
(6/16) Installing p11-kit-trust (0.24.0-r1)
ERROR: p11-kit-trust-0.24.0-r1: temporary error (try again later)
(7/16) Installing java-cacerts (1.0-r1)
(8/16) Installing krb5-conf (1.0-r2)
ERROR: java-cacerts-1.0-r1: temporary error (try again later)
ERROR: krb5-conf-1.0-r2: temporary error (try again later)
(9/16) Installing libcom_err (1.46.4-r0)
ERROR: libcom_err-1.46.4-r0: temporary error (try again later)
(10/16) Installing keyutils-libs (1.6.3-r0)
ERROR: keyutils-libs-1.6.3-r0: temporary error (try again later)
(11/16) Installing libverto (0.3.2-r0)
(12/16) Installing krb5-libs (1.19.3-r0)
(13/16) Installing pcsc-lite-libs (1.9.4-r0)
(14/16) Installing liblksctp (1.0.19-r0)
(15/16) Installing openjdk8-jre-base (8.322.06-r0)
(16/16) Installing openjdk8-jre (8.322.06-r0)
10 errors; 943 MiB in 291 packages
Connecting to github.com (192.30.255.113:443)
Connecting to objects.githubusercontent.com (185.199.108.133:443)
saving to 'synthea-with-dependencies.jar'
synthea-with-depende   0% |                                |  735k  0:03:06 ETA
synthea-with-depende   4% |*                               | 6032k  0:00:43 ETA
synthea-with-depende  10% |***                             | 14.5M  0:00:24 ETA
synthea-with-depende  16% |*****                           | 22.2M  0:00:20 ETA
synthea-with-depende  24% |*******                         | 33.4M  0:00:15 ETA
synthea-with-depende  32% |**********                      | 44.4M  0:00:12 ETA
synthea-with-depende  41% |*************                   | 55.5M  0:00:09 ETA
synthea-with-depende  48% |***************                 | 65.1M  0:00:08 ETA
synthea-with-depende  56% |******************              | 76.4M  0:00:06 ETA
synthea-with-depende  65% |********************            | 87.7M  0:00:05 ETA
synthea-with-depende  73% |***********************         | 99.4M  0:00:03 ETA
synthea-with-depende  82% |**************************      |  110M  0:00:02 ETA
synthea-with-depende  90% |****************************    |  121M  0:00:01 ETA
synthea-with-depende  98% |******************************* |  132M  0:00:00 ETA
synthea-with-depende 100% |********************************|  134M  0:00:00 ETA
'synthea-with-dependencies.jar' saved
/root/devtools: line 218: java: not found
ccda directory: /root/synthea/output/ccda
site: default
openemr path: /var/www/localhost/htdocs/openemr
development mode is on
Starting patients import
PHP Fatal error:  Uncaught DivisionByZeroError: Division by zero in /var/www/localhost/htdocs/openemr/contrib/util/ccda_import/import_ccda.php:120
Stack trace:
#0 {main}
  thrown in /var/www/localhost/htdocs/openemr/contrib/util/ccda_import/import_ccda.php on line 120
Completed run for following number of random patients: 600

[adunsulag]

@bradymiller Any thoughts on what could be causing this?

[jesdynf]

It doesn't feel like "the docker can't see the internet" like we see sometimes because some packages installed okay. The Alpine repo isn't down because some packages installed okay. Did some Alpine packages update but not others? Is there an Alpine package refresh that needs to run?

…

On Sat, Jun 4, 2022 at 10:32 AM Stephen Nielson ***@***.***> wrote: @bradymiller <https://github.com/bradymiller> Any thoughts on what could be causing this? — Reply to this email directly, view it on GitHub <#322 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AANMBRLQEV3I6LWFAFUIH4LVNNZKPANCNFSM5X3THVOQ> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

-- Asher Densmore-Lynn ***@***.***>

[adunsulag]

I'm doing a complete teardown and a docker-compose pull. Perhaps the codebase is out of sync with the images.

[adunsulag]

Looks like updating the docker images with a docker-compose pull openemr/openemr:flex-edge resolved the issue. I'll close this as fixed.

[bradymiller]

prob just a temp weird issue. just tested this and working on the flex docker. would rec using flex rather than flex-edge since that is built on alpine's development edge build which can break sometimes (and then not working on the alpine version for future planned release which is alpine 3.15).