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[REVIEW]: RivGraph: Automatic extraction and analysis of river and delta channel network topology #2952

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whedon opened this issue Jan 13, 2021 · 60 comments
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@whedon
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whedon commented Jan 13, 2021

Submitting author: @jonschwenk (Jon Schwenk)
Repository: https://github.com/jonschwenk/RivGraph
Version: v0.4
Editor: @kbarnhart
Reviewer: @eriknes, @leotrs
Archive: 10.5281/zenodo.4591559

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

Status

status

Status badge code:

HTML: <a href="https://joss.theoj.org/papers/d77053c498e659093660ad5c01613b9e"><img src="https://joss.theoj.org/papers/d77053c498e659093660ad5c01613b9e/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/d77053c498e659093660ad5c01613b9e/status.svg)](https://joss.theoj.org/papers/d77053c498e659093660ad5c01613b9e)

Reviewers and authors:

Please avoid lengthy details of difficulties in the review thread. Instead, please create a new issue in the target repository and link to those issues (especially acceptance-blockers) by leaving comments in the review thread below. (For completists: if the target issue tracker is also on GitHub, linking the review thread in the issue or vice versa will create corresponding breadcrumb trails in the link target.)

Reviewer instructions & questions

@eriknes & @leotrs, please carry out your review in this issue by updating the checklist below. If you cannot edit the checklist please:

  1. Make sure you're logged in to your GitHub account
  2. Be sure to accept the invite at this URL: https://github.com/openjournals/joss-reviews/invitations

The reviewer guidelines are available here: https://joss.readthedocs.io/en/latest/reviewer_guidelines.html. Any questions/concerns please let @kbarnhart know.

Please start on your review when you are able, and be sure to complete your review in the next six weeks, at the very latest

Review checklist for @eriknes

Conflict of interest

  • I confirm that I have read the JOSS conflict of interest (COI) policy and that: I have no COIs with reviewing this work or that any perceived COIs have been waived by JOSS for the purpose of this review.

Code of Conduct

General checks

  • Repository: Is the source code for this software available at the repository url?
  • License: Does the repository contain a plain-text LICENSE file with the contents of an OSI approved software license?
  • Contribution and authorship: Has the submitting author (@jonschwenk) made major contributions to the software? Does the full list of paper authors seem appropriate and complete?
  • Substantial scholarly effort: Does this submission meet the scope eligibility described in the JOSS guidelines

Functionality

  • Installation: Does installation proceed as outlined in the documentation?
  • Functionality: Have the functional claims of the software been confirmed?
  • Performance: If there are any performance claims of the software, have they been confirmed? (If there are no claims, please check off this item.)

Documentation

  • A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
  • Installation instructions: Is there a clearly-stated list of dependencies? Ideally these should be handled with an automated package management solution.
  • Example usage: Do the authors include examples of how to use the software (ideally to solve real-world analysis problems).
  • Functionality documentation: Is the core functionality of the software documented to a satisfactory level (e.g., API method documentation)?
  • Automated tests: Are there automated tests or manual steps described so that the functionality of the software can be verified?
  • Community guidelines: Are there clear guidelines for third parties wishing to 1) Contribute to the software 2) Report issues or problems with the software 3) Seek support

Software paper

  • Summary: Has a clear description of the high-level functionality and purpose of the software for a diverse, non-specialist audience been provided?
  • A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
  • State of the field: Do the authors describe how this software compares to other commonly-used packages?
  • Quality of writing: Is the paper well written (i.e., it does not require editing for structure, language, or writing quality)?
  • References: Is the list of references complete, and is everything cited appropriately that should be cited (e.g., papers, datasets, software)? Do references in the text use the proper citation syntax?

Review checklist for @leotrs

Conflict of interest

  • I confirm that I have read the JOSS conflict of interest (COI) policy and that: I have no COIs with reviewing this work or that any perceived COIs have been waived by JOSS for the purpose of this review.

Code of Conduct

General checks

  • Repository: Is the source code for this software available at the repository url?
  • License: Does the repository contain a plain-text LICENSE file with the contents of an OSI approved software license?
  • Contribution and authorship: Has the submitting author (@jonschwenk) made major contributions to the software? Does the full list of paper authors seem appropriate and complete?
  • Substantial scholarly effort: Does this submission meet the scope eligibility described in the JOSS guidelines

Functionality

  • Installation: Does installation proceed as outlined in the documentation?
  • Functionality: Have the functional claims of the software been confirmed?
  • Performance: If there are any performance claims of the software, have they been confirmed? (If there are no claims, please check off this item.)

Documentation

  • A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
  • Installation instructions: Is there a clearly-stated list of dependencies? Ideally these should be handled with an automated package management solution.
  • Example usage: Do the authors include examples of how to use the software (ideally to solve real-world analysis problems).
  • Functionality documentation: Is the core functionality of the software documented to a satisfactory level (e.g., API method documentation)?
  • Automated tests: Are there automated tests or manual steps described so that the functionality of the software can be verified?
  • Community guidelines: Are there clear guidelines for third parties wishing to 1) Contribute to the software 2) Report issues or problems with the software 3) Seek support

Software paper

  • Summary: Has a clear description of the high-level functionality and purpose of the software for a diverse, non-specialist audience been provided?
  • A statement of need: Do the authors clearly state what problems the software is designed to solve and who the target audience is?
  • State of the field: Do the authors describe how this software compares to other commonly-used packages?
  • Quality of writing: Is the paper well written (i.e., it does not require editing for structure, language, or writing quality)?
  • References: Is the list of references complete, and is everything cited appropriately that should be cited (e.g., papers, datasets, software)? Do references in the text use the proper citation syntax?
@whedon
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whedon commented Jan 13, 2021

Hello human, I'm @whedon, a robot that can help you with some common editorial tasks. @eriknes, @leotrs it looks like you're currently assigned to review this paper 🎉.

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

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If you haven't already, you should seriously consider unsubscribing from GitHub notifications for this (https://github.com/openjournals/joss-reviews) repository. As a reviewer, you're probably currently watching this repository which means for GitHub's default behaviour you will receive notifications (emails) for all reviews 😿

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whedon commented Jan 13, 2021

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

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whedon commented Jan 13, 2021

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1016/0013-7952(93)90074-M is OK
- 10.1038/sdata.2017.191 is OK
- 10.1002/(SICI)1099-1646(199603)12:2/3<201::AID-RRR390>3.0.CO;2-A is OK
- 10.1007/s00285-016-1054-9 is OK
- 10.1111/j.1365-3156.2005.01428.x is OK
- 10.1016/j.jtbi.2012.12.007 is OK
- 10.1623/hysj.48.3.317.45290 is OK
- 10.1371/journal.pntd.0000940 is OK
- 10.1111/j.1467-8306.1972.tb00873.x is OK
- 10.5194/hess-19-2247-2015 is OK
- 10.1002/2016EF000485 is OK
- 10.1002/2016EF000485 is OK
- 10.1002/2016EF000485 is OK
- 10.5194/gmd-9-587-2016 is OK
- 10.1126/science.aat0636 is OK
- 10.1029/2006RG000197 is OK
- 10.3402/polar.v34.26891 is OK
- 10.1002/wrcr.20440 is OK
- 10.1002/9781119217886.ch13 is OK
- 10.1029/WR018i004p01184 is OK
- 10.1016/j.ocemod.2003.12.004 is OK
- 10.1111/jfr3.12187 is OK
- 10.2112/05-0573.1 is OK
- 10.1016/j.sste.2017.06.001 is OK
- 10.1007/s10750-016-2664-3 is OK
- 10.1016/j.jsames.2012.09.002 is OK
- 10.1007/s10584-014-1084-5 is OK
- 10.1179/136485906X105480 is OK
- 10.1007/s12517-015-2114-y is OK
- 10.1016/j.earscirev.2012.05.003 is OK
- 10.5194/gmd-8-2701-2015 is OK
- 10.5194/gmd-8-2701-2015 is OK
- 10.1002/2016GL068550 is OK
- 10.1061/(ASCE)HE.1943-5584.0001513 is OK
- 10.1073/pnas.1606119113 is OK
- 10.1126/science.345.6193.128 is OK
- 10.1126/science.1226337 is OK
- 10.4103/0971-5916.176632 is OK
- 10.1371/journal.pone.0138082 is OK
- 10.1038/474151a is OK
- 10.1111/j.1948-7134.2014.12068.x is OK
- 10.1179/136485908X252296 is OK
- 10.1002/2013JF002845 is OK
- 10.1179/136485906X105499 is OK
- 10.1111/j.1365-2915.2008.00720.x is OK
- 10.1016/S0169-555X(01)00092-7 is OK
- 10.1016/j.advwatres.2019.03.016 is OK
- 10.1002/2013WR013918 is OK
- 10.1002/2013WR013918 is OK
- 10.1175/JHM-D-14-0155.1 is OK
- 10.5194/hess-21-589-2017 is OK
- 10.1002/hyp.10398 is OK
- 10.1002/2017WR020471 is OK
- 10.5194/hess-22-709-2018 is OK
- 10.1002/2017WR020471 is OK
- 10.1038/ngeo1593 is OK
- 10.1029/2018GL081883 is OK
- 10.3934/mbe.2015009 is OK
- 10.1038/s41561-018-0262-x is OK
- 10.1038/nature06045 is OK
- 10.1007/978-3-642-12796-0_2 is OK
- 10.1016/0022-1694(92)90126-G is OK
- 10.1179/136485906X105507 is OK
- 10.1016/S0022-1694(03)00129-X is OK
- 10.1890/06-0562.1 is OK
- 10.1038/ngeo553 is OK
- 10.1038/ngeo1799 is OK
- 10.1093/infdis/jiw363 is OK
- 10.1002/esp.3290120205 is OK
- 10.1111/j.1751-8369.2009.00126.x is OK
- 10.1007/s13280-010-0109-1 is OK
- 10.1002/2015JG003131 is OK
- 10.4161/dish.25216 is OK
- 10.1038/nclimate2949 is OK
- 10.1029/2018EF001091 is OK
- 10.1088/0266-5611/30/11/114007 is OK
- 10.1155/2016/8180158 is OK
- 10.1002/(SICI)1096-9837(199712)22:12<1109::AID-ESP810>3.0.CO;2-O is OK
- 10.1111/j.1365-2915.2007.00667.x is OK
- DOI 10.3201/eid1405.071066 is OK
- 10.1073/pnas.1408184111 is OK
- 10.5194/gmd-12-677-2019 is OK
- 10.1073/pnas.1302089111 is OK
- 10.1073/pnas.1614303114 is OK
- 10.1016/j.pocean.2006.10.004 is OK
- 10.1175/JCLI-D-15-0775.1 is OK
- 10.1038/ngeo1582 is OK
- 10.1111/j.1365-3156.2008.02216.x is OK
- 10.1007/s12517-014-1594-5 is OK
- 10.1073/pnas.0606955103 is OK
- 10.1093/trstmh/tru189 is OK
- 10.1080/17513758.2012.733427 is OK
- 10.1038/337452a0 is OK
- 10.1002/2015WR017096 is OK
- 10.5194/hess-22-831-2018 is OK
- 10.1002/2017GL074873 is OK
- 10.1016/j.cageo.2011.08.011 is OK
- 10.1016/j.gloplacha.2014.01.011 is OK
- 10.1007/s10021-006-9013-8 is OK
- 10.1016/0037-0738(69)90010-4 is OK
- 10.5194/gmd-4-1051-2011 is OK
- 10.5194/acp-10-9689-2010 is OK
- 10.1029/WR010i001p00106 is OK
- 10.1371/journal.pntd.0005429 is OK
- 10.1080/00221686909500264 is OK
- 10.1002/2013WR014227 is OK
- 10.1002/2014WR016139 is OK
- 10.1002/2017WR021859 is OK
- 10.1175/2008jcli2592.1 is OK
- 10.1139/e96-050 is OK
- 10.1007/s10533-018-0450-1 is OK
- 10.1016/j.advwatres.2015.01.004 is OK
- 10.5194/tc-13-557-2019 is OK
- 10.1029/2006jf000722 is OK
- 10.1038/nature19809 is OK
- 10.1002/wrcr.20250 is OK
- 10.1016/0022-1694(94)90095-7 is OK
- 10.1007/978-94-017-8863-2_12 is OK
- 10.1016/j.ejrs.2017.01.009 is OK
- 10.1134/s0097807814050029 is OK
- 10.1038/ncomms14592 is OK
- 10.1186/s12879-018-3124-7 is OK
- 10.1029/2012GL053387 is OK
- 10.1175/1525-7541(2000)001<0289:GCOSFS>2.0.CO;2 is OK
- 10.1073/pnas.1215218109 is OK
- 10.1073/pnas.1408439111 is OK
- 10.1016/S0278-4343(97)00003-4 is OK
- 10.1016/j.geomorph.2016.10.017 is OK
- 10.1016/j.cosust.2014.11.002 is OK
- 10.1002/rra.2682 is OK
- 10.1186/s13071-014-0544-0 is OK
- 10.1029/135GM09 is OK
- 10.1029/93TC01060 is OK
- 10.3390/rs11070750 is OK
- 10.1029/2020WR027199 is OK
- 10.1016/j.geomorph.2015.01.025 is OK
- 10.1016/j.earscirev.2019.04.009 is OK
- 10.1016/j.advwatres.2016.05.002 is OK
- 10.3390/w9100748 is OK
- 10.1017/S1049023X00008141 is OK
- 10.1007/s13280-011-0224-7 is OK
- 10.1007/s003820050269 is OK
- 10.1002/esp.3290120207 is OK
- 10.1016/j.envres.2016.07.026 is OK
- 10.1029/2010JF001955 is OK
- 10.1029/2010JG001300 is OK
- 10.1016/j.biocon.2010.08.013 is OK
- 10.1002/esp.3337 is OK
- 10.2475/ajs.266.6.417 is OK
- 10.1016/j.jtbi.2016.04.008 is OK
- 10.5194/gmd-9-1937-2016 is OK
- 10.5194/gmd-9-1937-2016 is OK
- 10.1002/esp.1016 is OK
- 10.1504/ijram.2012.047550 is OK
- 10.1007/s10588-013-9171-0 is OK
- 10.1029/2005RG000183 is OK
- 10.3334/ORNLDAAC/994 is OK
- 10.1016/j.jhydrol.2006.04.029 is OK
- 10.1002/hyp.7394 is OK
- 10.1038/nclimate2051 is OK
- 10.5589/m03-006 is OK
- 10.1111/j.1365-2311.2007.00927.x is OK
- 10.1002/hyp.11117 is OK
- 10.1016/j.ocemod.2010.09.002 is OK
- 10.1029/2019GL082027 is OK
- 10.1016/0169-555X(95)00047-9 is OK
- 10.1007/s10040-016-1386-y is OK
- 10.1130/G22633.1 is OK
- 10.1130/GES00065.1 is OK
- 10.1002/2013WR014283 is OK
- 10.1029/2018JC014510 is OK
- 10.1201/9781439833896 is OK
- 10.1016/j.csr.2011.12.001 is OK
- 10.1016/j.csr.2011.12.001 is OK
- 10.5194/essd-10-185-2018 is OK
- ARTN e100389210.1371/journal.pcbi.1003892 is OK
- 10.1111/j.1365-2486.2005.00966.x is OK
- Doi 10.2307/2986138 is OK
- 10.1002/(SICI)1096-9837(200004)25:4<421::AID-ESP65>3.0.CO;2-Q is OK
- 10.1016/j.jenvman.2013.03.026 is OK
- 10.1080/16742834.2018.1452520 is OK
- 10.1061/(ASCE)0733-9399(2007)133:4(400) is OK
- 10.1029/2018MS001603 is OK
- 10.1029/2018MS001603 is OK
- 10.1016/j.jhydrol.2009.02.007 is OK
- 10.1002/hyp.7795 is OK
- 10.1038/nature06958 is OK
- 10.1002/eap.1404 is OK
- 10.1002/ece3.3590 is OK
- 10.1016/j.geomorph.2005.09.008 is OK
- 10.1016/j.rse.2017.06.031 is OK
- 10.1016/S0169-555X(99)00032-X is OK
- 10.1029/WR017i004p01087 is OK
- 10.1002/esp.3290080204 is OK
- 10.1111/j.1461-0248.2006.01007.x is OK
- 10.3354/meps048057 is OK
- 10.1016/j.pocean.2006.10.001 is OK
- 10.1111/j.1467-9574.2011.00483.x is OK
- 10.1007/s00442-003-1382-5 is OK
- 10.5194/tc-6-221-2012 is OK
- 10.5194/tc-9-151-2015 is OK
- 10.1029/WR010i003p00499 is OK
- 10.1016/j.pce.2007.04.003 is OK
- 10.1002/2012WR013358 is OK
- 10.1016/0006-3207(81)90035-5 is OK
- 10.5194/gmd-9-4185-2016 is OK
- 10.1175/BAMS-D-12-00014.1 is OK
- 10.1175/JCLI-D-15-0415.1 is OK
- 10.1186/s40562-018-0109-8 is OK
- 10.1007/s10533-018-0431-4 is OK
- 10.1086/684223 is OK
- 10.1038/s41561-017-0056-6 is OK
- 10.1029/2003EO480001 is OK
- 10.5194/tcd-9-3351-2015 is OK
- 10.5194/tcd-9-3351-2015 is OK
- 10.1038/s41586-020-2649-2 is OK
- 10.1175/jcli3532.1 is OK
- 10.1038/Nclimate3271 is OK
- 10.1177/0022343317691330 is OK
- 10.1002/2017WR021289 is OK
- 10.1029/2019JF005206 is OK
- 10.1130/0016-7606(1975)86<487:TCOCMO>2.0.CO;2 is OK
- ARTN e100423910.1371/journal.pcbi.1004239 is OK
- 10.1061/(ASCE)WR.1943-5452.0000258 is OK
- 10.1007/s10584-005-5352-2 is OK
- 10.1038/nclimate1911 is OK
- 10.1007/s10980-013-9902-0 is OK
- 10.1029/2006JC003642 is OK
- 10.1007/s12237-011-9386-6 is OK
- 10.1002/9781118470596.ch1 is OK
- 10.1002/9781118470596.ch1 is OK
- 10.1139/T09-058 is OK
- 10.1007/s13280-011-0219-4 is OK
- 10.1029/WR020i011p01659 is OK
- 10.1109/MCSE.2007.55 is OK
- 10.1175/BAMS-D-12-00121.1 is OK
- 10.1007/s10584-011-0153-2 is OK
- 10.1016/j.ocemod.2016.02.004 is OK
- 10.1016/S0341-8162(73)80016-5 is OK
- 10.1038/sdata.2018.224 is OK
- 10.1016/j.rse.2017.03.044 is OK
- 10.1002/2014JC010353 is OK
- 10.1002/2016GL070067 is OK
- 10.1002/2016GL070067 is OK
- 10.1007/s12665-017-6593-x is OK
- 10.1038/ngeo2636 is OK
- 10.1371/journal.pone.0039067 is OK
- 10.1186/s12889-017-4294-8 is OK
- 10.1002/2017JC013365 is OK
- 10.12952/journal.elementa.000124 is OK
- 10.1214/17-AOAS1090 is OK
- 10.1029/2008gl036205 is OK
- Artn 04402110.1088/1748-9326/8/4/044021 is OK
- Artn 08400310.1088/1748-9326/11/8/084003 is OK
- 10.1088/1748-9326/aae471 is OK
- 10.3390/rs11040374 is OK
- 10.5281/zenodo.3946761 is OK
- 10.1007/s00367-004-0188-8 is OK
- 10.1016/j.geomorph.2005.11.003 is OK
- 10.2307/2845334 is OK
- 10.1016/j.coldregions.2012.08.002 is OK
- 10.1007/s13253-014-0182-1 is OK
- 10.1007/s00227-012-2135-y is OK
- 10.1016/j.scitotenv.2017.10.044 is OK
- 10.1130/GSAB-P2-91-1119 is OK
- Doi 10.1111/1467-9868.00294 is OK
- 10.1130/0091-7613(1974)2<461:LEAODO>2.0.CO;2 is OK
- 10.1080/02723646.1981.10642205 is OK
- 10.14710/geoplanning.4.2.121-130 is OK
- 10.1007/s10584-013-0705-8 is OK
- 10.1016/0034-4257(82)90004-9 is OK
- 10.1111/j.1600-0870.2010.00475.x is OK
- 10.1002/esp.4073 is OK
- 10.1016/j.geomorph.2008.10.005 is OK
- 10.4230/LIPICS.SOCG.2017.48 is OK
- 10.2112/JCOASTRES-D-11-00060.1 is OK
- 10.1029/2019WR026867 is OK
- 10.2151/jmsj.2015-001 is OK
- 10.1111/j.1365-3091.1963.tb01216.x is OK
- 10.1002/2013EF000184 is OK
- 10.1623/hysj.54.1.43 is OK
- 10.1623/hysj.54.1.43 is OK
- 10.1175/2008JTECHO587.1 is OK
- 10.5194/essd-2016-36 is OK
- 10.1080/02626667.2012.745082 is OK
- 10.1029/2006JC003978 is OK
- 10.1016/j.advwatres.2004.02.020 is OK
- 10.3390/ijgi3020638 is OK
- 10.1016/j.jhydrol.2018.10.038 is OK
- 10.4269/ajtmh.2009.09-0115 is OK
- 10.1007/s12237-010-9362-6 is OK
- 10.1029/WR022i005p00731 is OK
- 10.1111/j.1752-1688.2006.tb04515.x is OK
- 10.1038/nature22333 is OK
- 10.1029/2006wr005528 is OK
- 10.1016/0022-1694(93)90157-5 is OK
- 10.1029/2008GL033985 is OK
- 10.1038/ncomms15611 is OK
- 10.1016/j.jhydrol.2004.03.028 is OK
- 10.1029/2008EO100001 is OK
- 10.1890/100125 is OK
- 10.1002/hyp.9740 is OK
- 10.1002/2016JC012006 is OK
- 10.1179/136485906X105516 is OK
- 10.1073/pnas.0705414105 is OK
- 10.1002/esp.3739 is OK
- 10.1175/JHM-D-12-015.1 is OK
- 10.1175/Jhm-D-12-015.1 is OK
- 10.1002/2015MS000471 is OK
- 10.1175/Jhm-D-14-0079.1 is OK
- 10.1016/j.geomorph.2016.10.018 is OK
- 10.1016/j.csda.2017.05.005 is OK
- 10.1175/JPO-D-17-0085.1 is OK
- 10.1002/wat2.1424 is OK
- 10.1016/j.tranpol.2015.09.002 is OK
- 10.1002/2015JG003120 is OK
- 10.1080/1088937X.2012.733893 is OK
- 10.1016/B978-0-12-814003-1.00039-3 is OK
- 10.1029/2018JG004659 is OK
- 10.1111/j.1365-3156.2008.02162.x is OK
- 10.1111/j.1365-3156.2011.02797.x is OK
- 10.1029/2018RG000607 is OK
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- 10.1002/esp.3482 is OK
- 10.1002/hyp.1035 is OK
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- 10.1007/s12237-010-9357-3 is OK
- 10.1038/nclimate2873 is OK
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- 10.1051/mmnp/20149211 is OK
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MISSING DOIs

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- 10.1007/s11004-006-9056-6 may be a valid DOI for title: Forward and Inverse Transformations between Cartesian and Channel-Fitted Coordinate Systems for Meandering Rivers
- 10.1016/j.jhydrol.2004.03.028 may be a valid DOI for title: Development and Validation of a Global Database of Lakes, Reservoirs and Wetlands
- 10.3133/pp252 may be a valid DOI for title: The Hydraulic Geometry of Stream Channels and Some Physiographic Implications
- 10.2475/ajs.251.8.606 may be a valid DOI for title: Downstream Change of Velocity in Rivers
- 10.3133/pp282b may be a valid DOI for title: River Channel Patterns: Braided, Meandering, and Straight
- 10.1029/2010wr009607 may be a valid DOI for title: River-to-Lake Connectivities, Water Renewal, and Aquatic Habitat Diversity in the Mackenzie River Delta
- 10.1016/j.geomorph.2005.01.011 may be a valid DOI for title: Morphology and Geotechnique of Active-Layer Detachment Failures in Discontinuous and Continuous Permafrost, Northern Canada
- 10.1002/ppp.522 may be a valid DOI for title: Frequency and Magnitude of Active-Layer Detachment Failures in Discontinuous and Continuous Permafrost, Northern Canada
- 10.1016/j.gloplacha.2004.12.007 may be a valid DOI for title: Long-Term Open-Water Season Stream Temperature Variations and Changes over Lena River Basin in Siberia
- 10.1186/1476-072x-13-50 may be a valid DOI for title: Modeling Tools for Dengue Risk Mapping-a Systematic Review
- 10.1002/esp.1947 may be a valid DOI for title: Modelling Mid-channel Bars in Meandering Channels
- 10.1590/s0074-02762007005000056 may be a valid DOI for title: Variation in Aedes Aegypti (Diptera: Culicidae) Container Productivity in a Slum and a Suburban District of Rio de Janeiro during Dry and Wet Seasons
- 10.1590/s0074-02762008000600016 may be a valid DOI for title: Mosquito Traps Designed to Capture Aedes Aegypti (Diptera: Culicidae) Females: Preliminary Comparison of Adultrap, MosquiTRAP and Backpack Aspirator Efficiency in a Dengue-Endemic Area of Brazil
- 10.1371/currents.outbreaks.f0b3978230599a56830ce30cb9ce0500 may be a valid DOI for title: Towards an Early Warning System for Forecasting Human West Nile Virus Incidence
- 10.1080/17513758.2015.1005698 may be a valid DOI for title: A Network-Patch Methodology for Adapting Agent-Based Models for Directly Transmitted Disease to Mosquito-Borne Disease
- 10.1111/tbed.12082 may be a valid DOI for title: Inter-Epidemic and Between-Season Persistence of Rift Valley Fever: Vertical Transmission or Cryptic Cycling?
- 10.1002/esp.3482 may be a valid DOI for title: Network Concepts to Describe Channel Importance and Change in Multichannel Systems: Test Results for the Jamuna River, Bangladesh
- 10.1029/97wr01033 may be a valid DOI for title: Hydrograph Separations in an Arctic Watershed Using Mixing Model and Graphical Techniques
- 10.1130/dnag-gna-o1.255 may be a valid DOI for title: Movement and Storage of Sediment in Rivers of the United States and Canada
- 10.1130/0016-7606(1996)108<1089:cfgats>2.3.co;2 may be a valid DOI for title: Channel-Floodplain Geomorphology along the Solimoes-Amazon River, Brazil
- 10.1002/rra.1360 may be a valid DOI for title: River Channel Cutoff Dynamics, Sacramento River, California, USA
- 10.1038/415514a may be a valid DOI for title: Increasing Risk of Great Floods in a Changing Climate
- 10.5194/tc-9-781-2015 may be a valid DOI for title: Sensitivity of Airborne Geophysical Data to Sublacustrine and Near-Surface Permafrost Thaw
- 10.1016/s0025-3227(98)00101-7 may be a valid DOI for title: River-Plume Sedimentation Modeling for Sequence Stratigraphy: Application to the Eel Margin, Northern California
- 10.1603/0022-2585-41.3.502 may be a valid DOI for title: Evaluation of a Sampling Methodology for Rapid Assessment of Aedes Aegypti Infestation Levels in Iquitos, Peru
- 10.1179/136485906x105534 may be a valid DOI for title: Aedes Aegypti (Diptera: Culicidae) Production from Non-Residential Sites in the Amazonian City of Iquitos, Peru
- 10.1016/s0169-555x(03)00046-1 may be a valid DOI for title: Estimation of Error in Bankfull Width Comparisons from Temporally Sequenced Raw and Corrected Aerial Photographs
- 10.1186/1471-2334-14-167 may be a valid DOI for title: Climate Change and Dengue: A Critical and Systematic Review of Quantitative Modelling Approaches
- 10.1130/0016-7606(1986)97<497:asaobe>2.0.co;2 may be a valid DOI for title: A Statistical Analysis of Bank Erosion and Channel Migration in Western Canada
- 10.1179/136485906x105462 may be a valid DOI for title: Pupal/Demographic Surveys to Inform Dengue-Vector Control
- 10.1111/j.1467-8306.1966.tb00541.x may be a valid DOI for title: Man and Geomorphic Process in the Chemung River Valley, New York and Pennsylvania
- 10.1007/s10021-009-9253-5 may be a valid DOI for title: Retention of Riverine Sediment and Nutrient Loads by Coastal Plain Floodplains
- 10.1016/j.geomorph.2013.03.014 may be a valid DOI for title: Multi-Scale Factors Controlling the Pattern of Floodplain Width at a Network Scale: The Case of the Rhône Basin, France
- 10.1111/j.1365-3091.1993.tb01347.x may be a valid DOI for title: Variability of Deltaic Processes in Terms of Sediment Supply, with Particular Emphasis on Grain-Size
- 10.1002/ppp.538 may be a valid DOI for title: Warming of Permafrost in the Arctic National Wildlife Refuge, Alaska
- 10.1016/j.geomorph.2008.02.007 may be a valid DOI for title: The Effects of Variability in Bank Material Properties on Riverbank Stability: Goodwin Creek, Mississippi
- 10.1029/2004jf000158 may be a valid DOI for title: Formation of Oriented Thaw Lakes by Thaw Slumping
- 10.1163/9789004408425_004 may be a valid DOI for title: China’s Arctic Policy
- 10.1126/science.1122593 may be a valid DOI for title: Trajectory Shifts in the Arctic and Subarctic Freshwater Cycle
- 10.1002/1099-1085(200011/12)14:16/17<3011::aid-hyp132>3.0.co;2-b may be a valid DOI for title: Channel Instability as a Control on Silting Dynamics and Vegetation Patterns within Perifluvial Aquatic Zones
- 10.1002/9781119940791.ch11 may be a valid DOI for title: Biophysical Characterisation of Fluvial Corridors at Reach to Network Scales
- 10.1590/s0036-46652002000500002 may be a valid DOI for title: Frequency, Diversity, and Productivity Study on the Aedes Aegypti Most Preferred Containers in the City of Manaus, Amazonas, Brazil
- 10.1002/9781444304473.ch32 may be a valid DOI for title: Turbidite Depositional Patterns and Flow Characteristics, Navy Submarine Fan, California Borderland
- 10.1641/0006-3568(2000)050[0807:reohao]2.0.co;2 may be a valid DOI for title: Regional Effects of Hydrologic Alterations on Riverine Macrobiota in the New World: Tropical-Temperate Comparisons
- 10.1002/hyp.369 may be a valid DOI for title: Climatic Control of River-Ice Hydrology: A Review
- 10.1139/l02-040 may be a valid DOI for title: Ice Breakup: A Neglected Factor in River Ecology
- 10.14358/pers.70.12.1383 may be a valid DOI for title: A Review of Techniques for Extracting Linear Features from Imagery
- 10.1111/gcb.12500 may be a valid DOI for title: Cumulative Geoecological Effects of 62 Years of Infrastructure and Climate Change in Ice-rich Permafrost Landscapes, Prudhoe Bay Oilfield, Alaska
- 10.1214/07-aoas108 may be a valid DOI for title: A Multivariate Semiparametric Bayesian Spatial Modeling Framework for Hurricane Surface Wind Fields
- 10.1016/j.geomorph.2004.07.013 may be a valid DOI for title: Statistical Analysis of Lateral Migration of the Rio Grande, New Mexico
- 10.1063/1.1745010 may be a valid DOI for title: Capillary Conduction of Liquids through Porous Mediums
- 10.3133/sir20135168 may be a valid DOI for title: Recent (circa 1998 to 2011) Channel-Migration Rates of Selected Streams in Indiana
- 10.1111/j.1752-1688.1995.tb03389.x may be a valid DOI for title: Comparison of the Magnitude of Erosion along Two Large Regulated Rivers
- 10.1603/0022-2585-41.4.634 may be a valid DOI for title: Adult Size and Distribution of Aedes Aegypti (Diptera: Culicidae) Associated with Larval Habitats in Iquitos, Peru
- 10.5194/esurf-8-87-2020 may be a valid DOI for title: Determining Flow Directions in River Channel Networks Using Planform Morphology and Topology
- 10.26719/2015.18.12.1217 may be a valid DOI for title: Dengue Vector Control and Surveillance during a Major Outbreak in a Coastal Red Sea Area in Sudan
- 10.1016/0022-5193(77)90265-x may be a valid DOI for title: Reaction Kinetics of Poikilotherm Development
- 10.1002/ppp.582 may be a valid DOI for title: Patterns of Permafrost Formation and Degradation in Relation to Climate and Ecosystems
- 10.3133/ofr91502 may be a valid DOI for title: Geomorphic and Vegetative Recovery Processes along Modified Stream Channels of West Tennessee
- 10.1146/annurev.earth.32.101802.120201 may be a valid DOI for title: River Avulsions and Their Deposits
- 10.2172/88648 may be a valid DOI for title: TRANSIMS: Transportation Analysis and Simulation System
- 10.1029/2007wr006133 may be a valid DOI for title: Estimation of River Discharge, Propagation Speed, and Hydraulic Geometry from Space: Lena River, Siberia
- 10.1590/s0037-86822012000200007 may be a valid DOI for title: Variation in Aedes Aegypti (Linnaeus) (Diptera, Culicidae) Infestation in Artificial Containers in Caxias, State of Maranhao, Brazil
- 10.1139/s04-032 may be a valid DOI for title: Large-Scale Flow Structures and Stability in Shallow Flows
- 10.4269/ajtmh.2003.68.209 may be a valid DOI for title: Dengue and Its Vectors in Thailand: Calculated Transmission Risk from Total Pupal Counts of Aedes Aegypti and Association of Wing-Length Measurements with Aspects of the Larval Habitat
- 10.1002/esp.2119 may be a valid DOI for title: Historical Channel Narrowing along the Rio Grande near Albuquerque, New Mexico in Response to Peak Discharge Reductions and Engineering: Magnitude and Uncertainty of Change from Air Photo Measurements
- 10.1016/0198-0254(85)92806-7 may be a valid DOI for title: The Prodelta Environment of a Fjord - Suspended Particle Dynamics
- 10.1016/0022-1694(94)02540-r may be a valid DOI for title: A Review of Baseflow Recession Analysis
- 10.1038/sdata.2017.4 may be a valid DOI for title: WorldPop, Open Data for Spatial Demography
- 10.1175/bams-d-11-00094.1 may be a valid DOI for title: An Overview of CMIP5 and the Experiment Design
- 10.4324/9781003026709-6 may be a valid DOI for title: Bank Processes, Bed Material Movement and Planform Development in a Meandering River
- 10.3376/1081-1710(2008)33[76:spoaad]2.0.co;2 may be a valid DOI for title: Seasonal Profiles of Aedes Aegypti (Diptera: Culicidae) Larval Habitats in an Urban Area of Costa Rica with a History of Mosquito Control
- 10.1016/j.ocemod.2016.08.002 may be a valid DOI for title: Impacts of the Representation of Riverine Freshwater Input in the Community Earth System Model
- 10.4269/ajtmh.1995.53.595 may be a valid DOI for title: Understanding Productivity, a Key to Aedes Aegypti Surveillance
- 10.4269/ajtmh.1996.54.543 may be a valid DOI for title: Critical Examination of Aedes Aegypti Indices: Correlations with Abundance
- 10.1111/j.1365-2486.2007.01381.x may be a valid DOI for title: The Disappearance of Relict Permafrost in Boreal North America: Effects on Peatland Carbon Storage and Fluxes
- 10.1002/ppp.3430020207 may be a valid DOI for title: Differential Frost Heave, Load Casting and Convection: Converging Mechanisms; a Discussion of the Origin of Cryoturbations
- 10.1002/ppp.3430020207 may be a valid DOI for title: Differential Frost Heave, Load Casting and Convection: Converging Mechanisms; a Discussion of the Origin of Cryoturbations
- 10.1515/ijnsns.2009.10.3.273 may be a valid DOI for title: Accelerating Markov Chain Monte Carlo Simulation by Differential Evolution with Self-Adaptive Randomized Subspace Sampling
- 10.1080/04353676.1987.11880197 may be a valid DOI for title: Riverbank Erosion in the Colville Delta, Alaska
- 10.1016/s0169-555x(03)00157-0 may be a valid DOI for title: Hydrologic and Geomorphic Processes in the Colville River Delta, Alaska
- 10.1038/nature05040 may be a valid DOI for title: Methane Bubbling from Siberian Thaw Lakes as a Positive Feedback to Climate Warming
- 10.1002/2017jd026899 may be a valid DOI for title: Hydrological Drought in the Anthropocene: Impacts of Local Water Extraction and Reservoir Regulation in the US
- 10.1002/(sici)1099-1530(199801/03)9:1<23::aid-ppp274>3.0.co;2-y may be a valid DOI for title: Permafrost Changes in Rock Walls and the Retreat of Alpine Glaciers: A Thermal Modelling Approach
- 10.1029/2006jf000696 may be a valid DOI for title: Time-Dependent Morphology of Thaw Lakes and Taliks in Deep and Shallow Ground Ice
- 10.1111/j.1752-1688.2007.00160.x may be a valid DOI for title: Use of Synthetic Aperture Radar for Selecting Alaskan Lakes for Winter Water Use1
- 10.1093/jmedent/45.6.1173 may be a valid DOI for title: Rapid Estimation of Aedes Aegypti Population Size Using Simulation Modeling, with a Novel Approach to Calibration and Field Validation
- 10.1029/2007gl030156 may be a valid DOI for title: Modeling Large-scale Inundation of Amazonian Seasonally Flooded Wetlands
- 10.2475/ajs.257.3.204 may be a valid DOI for title: Factors Influencing Erosion of a Cohesive River Bank
- 10.1016/b978-0-12-812365-2.00003-2 may be a valid DOI for title: Mosquito-Borne Diseases
- 10.1016/b978-0-12-812365-2.00003-2 may be a valid DOI for title: Mosquito-Borne Diseases
- 10.1306/819a4274-16c5-11d7-8645000102c1865d may be a valid DOI for title: Variations in Morphology of Major River Deltas as Functions of Ocean Wave and River Dischare Regimes
- 10.1086/628028 may be a valid DOI for title: Mississippi River Mouth Processes: Effluent Dynamics and Morphologic Development
- 10.1080/01431160600589179 may be a valid DOI for title: Modification of Normalised Difference Water Index (NDWI) to Enhance Open Water Features in Remotely Sensed Imagery
- 10.1016/j.ecolmodel.2008.10.005 may be a valid DOI for title: Uncertainty Analysis of Transient Population Dynamics
- 10.1016/j.csda.2010.06.028 may be a valid DOI for title: Understanding and Comparisons of Different Sampling Approaches for the Fourier Amplitudes Sensitivity Test (FAST)
- 10.1029/2010wr009726 may be a valid DOI for title: A Physically Based Description of Floodplain Inundation Dynamics in a Global River Routing Model
- 10.1002/ppp.451 may be a valid DOI for title: Shrinking Thermokarst Ponds and Groundwater Dynamics in Discontinuous Permafrost near Council, Alaska
- 10.1029/2009gb003481 may be a valid DOI for title: Rapid Carbon Accretion and Organic Matter Pool Stabilization in Riverine Floodplain Soils
- 10.1002/(sici)1099-1530(199701)8:1<45::aid-ppp240>3.0.co;2-k may be a valid DOI for title: Effects of Climate on the Active Layer and Permafrost on the North Slope of Alaska, U.S.A
- 10.1080/10889370802175895 may be a valid DOI for title: Statistics and Characteristics of Permafrost and Ground-Ice Distribution in the Northern Hemisphere
- 10.1016/j.gloplacha.2007.05.003 may be a valid DOI for title: Transient Projections of Permafrost Distribution in Canada during the 21st Century under Scenarios of Climate Change

INVALID DOIs

- 10.1590/S0120-41572015000200014 is INVALID
- 10.2987/8756-971X(2006)22[565:APIKTT]2.0.CO;2 is INVALID
- ARTN e2515: 10.1371/journal.pntd.0002515 is INVALID
- 10.1641/0006-3568(2004)054[0413:TNDHHC]2.0.CO;2 is INVALID
- Artn 20160005: 10.1098/Rsif.2016.0005 is INVALID
- Artn W12445: 10.1029/2008wr006917 is INVALID
- ARTN e0124037: 10.1371/journal.pone.0124037 is INVALID
- ARTN e2503: 10.1371/journal.pntd.0002503 is INVALID
- ARTN e0149282: 10.1371/journal.pone.0149282 is INVALID
- Artn Rg2004: 10.1029/2005rg000183 is INVALID
- 10.1002/rra is INVALID
- Artn 218: 10.1186/S13071-018-2779-7 is INVALID
- 10.1130/0016-7606(1972)83[475:ACDFSG]2.0.CO;2 is INVALID
- Artn 1046: 10.3390/Ijerph14091046 is INVALID
- 105194/bg-10-1-2013 is INVALID
- ARTN e08347: 10.7554/eLife.08347 is INVALID
- ARTN e22701: 10.1371/journal.pone.0022701 is INVALID
- ARTN e52235: 10.1371/journal.pone.0052235 is INVALID
- 10.1029/2010WR009712@10.1002/(ISSN)1944-7973.SBRS1 is INVALID
- ARTN e0005828: 10.1371/journal.pntd.0005828 is INVALID
- Artn 20: 10.1186/1756-3305-6-20 is INVALID
- ARTN e508: 10.1371/journal.pntd.0000508 is INVALID
- ARTN e0005347: 10.1371/journal.pntd.0005347 is INVALID
- ARTN e15272: 10.7554/eLife.15272 is INVALID
- Artn 167: 10.1186/1471-2334-14-167 is INVALID
- Artn 20162078: 10.1098/Rspb.2016.2078 is INVALID
- 10.1130/0016-7606(1994)106<1494 is INVALID
- 10.1579/0044-7447(2006)35[339:hciafe]2.0.co;2 is INVALID
- Artn 20120921: 10.1098/Rsif.2012.0921 is INVALID
- http://dx.doi.org/10.15585/mmwr.mm6717e1 is INVALID because of 'https://doi.org/' prefix
- Artn 180073: 10.1038/Sdata.2018.73 is INVALID
- ARTN e71247: 10.1371/journal.pone.0071247 is INVALID
- ARTN e1795: 10.1371/journal.pntd.0001795 is INVALID
- 10.1130/0016-7606(1966)77[859:MRBFFJ]2.0.CO;2 is INVALID
- ARTN e2207: 10.1371/journal.pntd.0002207 is INVALID
- ARTN e830: 10.1371/journal.pntd.0000830 is INVALID
- http://dx.doi.org/10.1016/j.apm.2013.05.036 is INVALID because of 'https://doi.org/' prefix

@jonschwenk
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@kbarnhart After a Zotero update, it started exporting my full library by default instead of just a particular collection. whedon's DOI check is thus of my entire library, not just the references in the paper. I have fixed the .bib file in the RivGraph repo to only contain the relevant refs, but I'm not sure how to ask whedon to re-run the DOI check.

@kbarnhart
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@whedon check references

@whedon
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whedon commented Jan 13, 2021

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1029/2020WR027199 is OK
- 10.1038/s41586-020-2649-2 is OK
- 10.1029/2019JF005206 is OK
- 10.1109/MCSE.2007.55 is OK
- 10.5281/zenodo.3946761 is OK
- 10.1029/2019WR026867 is OK
- 10.1002/esp.3482 is OK
- 10.3390/ijgi9110658 is OK
- 10.1002/2016EA000196 is OK
- 10.13140/RG.2.2.31051.44323 is OK
- 10.5194/esurf-8-87-2020 is OK
- 10.5281/zenodo.3783866 is OK
- 10.1002/2014WR016604 is OK
- 10.1002/2014WR016577 is OK
- 10.1073/pnas.1708404114 is OK
- 10.1002/essoar.10502024.1 is OK
- 10.7717/peerj.453 is OK
- 10.1029/2019GL086710 is OK

MISSING DOIs

- None

INVALID DOIs

- None

@kbarnhart
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@jonschwenk done. for reference here is the list of things whedon can do

@leotrs
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leotrs commented Jan 25, 2021

In trying to install the package, I ran into some problems reported here. I will continue my review pending the fix.

Update: the mentioned issue is fixed and now I can continue my review.

@whedon
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whedon commented Jan 27, 2021

👋 @eriknes, please update us on how your review is going.

@whedon
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whedon commented Jan 27, 2021

👋 @leotrs, please update us on how your review is going.

@kbarnhart
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@eriknes and @leotrs, we have an automatic reminder two weeks into the review. Feel free to provide an update if you have one.

@leotrs making an issue in the main repo and linking it here is perfect. Thank you! If you paste openjournals/joss-reviews/issues/2952 into the issue then GitHub links the issues nicely.

@leotrs
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leotrs commented Feb 1, 2021

I have finished the review checklist and it is my opinion that the software and manuscript meet JOSS standards.

Issues in target repository associated to my review:

@jonschwenk
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@kbarnhart Just curious how things are going here. Haven't seen any movement from @eriknes...

@eriknes
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eriknes commented Feb 18, 2021 via email

@kbarnhart
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@jonschwenk thanks for checking in. The review started Jan 13th, and JOSS is requesting reviewers complete their reviews within 6 weeks. @eriknes if you could complete the review by the middle of next week that would be great.

@eriknes
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eriknes commented Feb 25, 2021 via email

@kbarnhart
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@whedon re-invite @eriknes as reviewer

@whedon
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whedon commented Feb 26, 2021

OK, the reviewer has been re-invited.

@eriknes please accept the invite by clicking this link: https://github.com/openjournals/joss-reviews/invitations

@kbarnhart
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@eriknes this link should work. Let me know if it doesnt.

kbarnhart added a commit to kbarnhart/RivGraph that referenced this issue Mar 9, 2021
Minor copyedits associated with the JOSS publication. 

openjournals/joss-reviews/issues/2952
@kbarnhart
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@jonschwenk I've proposed some very minor copyedits at VeinsOfTheEarth/RivGraph/pull/48

Please consider, and if you don't disagree, merge. Once you've done that please double check that the paper compiles and complete the following next steps:

  • Make a tagged release of your software, and list the version tag of the archived version here.
  • Archive the reviewed software in Zenodo or a similar service (e.g., figshare, an institutional repository)
  • Check the archival deposit (e.g., in Zenodo) has the correct metadata. This includes the title (should match the paper title) and author list (make sure the list is correct and people who only made a small fix are not on it). You may also add the authors' ORCID.
  • Please list the DOI of the archived version here.

I can then move forward with accepting the submission.

@jonschwenk
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@whedon generate pdf

@whedon
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whedon commented Mar 9, 2021

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

@jonschwenk
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@whedon generate pdf

@whedon
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whedon commented Mar 9, 2021

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

@jonschwenk
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jonschwenk commented Mar 9, 2021

@kbarnhart Checklist complete.

  • Recompiled paper
  • New tagged release has been created: v0.4
  • v0.4 has been stored at Zenodo.
  • Metadata matches title and authors, includes ORCIDs.
  • Zenodo DOI: 10.5281/zenodo.4591559

@kbarnhart
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@whedon set 10.5281/zenodo.4591559 as archive

@whedon
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whedon commented Mar 9, 2021

OK. 10.5281/zenodo.4591559 is the archive.

@kbarnhart
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@whedon set v0.4 as version

@whedon
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whedon commented Mar 9, 2021

OK. v0.4 is the version.

@kbarnhart
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@whedon accept

@whedon
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whedon commented Mar 9, 2021

Attempting dry run of processing paper acceptance...

@whedon whedon added the recommend-accept Papers recommended for acceptance in JOSS. label Mar 9, 2021
@whedon
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whedon commented Mar 9, 2021

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1029/2020WR027199 is OK
- 10.1038/s41586-020-2649-2 is OK
- 10.1029/2019JF005206 is OK
- 10.1109/MCSE.2007.55 is OK
- 10.5281/zenodo.3946761 is OK
- 10.1029/2019WR026867 is OK
- 10.1002/esp.3482 is OK
- 10.3390/ijgi9110658 is OK
- 10.1002/2016EA000196 is OK
- 10.13140/RG.2.2.31051.44323 is OK
- 10.5194/esurf-8-87-2020 is OK
- 10.5281/zenodo.3783866 is OK
- 10.1002/2014WR016604 is OK
- 10.1002/2014WR016577 is OK
- 10.1073/pnas.1708404114 is OK
- 10.1002/essoar.10502024.1 is OK
- 10.7717/peerj.453 is OK
- 10.1029/2019GL086710 is OK

MISSING DOIs

- None

INVALID DOIs

- None

@kbarnhart
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@jonschwenk I've now recommended that is submission be accepted and published. One of the JOSS EICs will handle the final steps @openjournals/joss-eics. Congratulations to you and @elbeejay on a valuable contribution to research software.

Many thanks to reviewers @leotrs and @eriknes for contributing thoughtful and constructive reviews.

@whedon
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whedon commented Mar 9, 2021

👋 @openjournals/joss-eics, this paper is ready to be accepted and published.

Check final proof 👉 openjournals/joss-papers#2137

If the paper PDF and Crossref deposit XML look good in openjournals/joss-papers#2137, then you can now move forward with accepting the submission by compiling again with the flag deposit=true e.g.

@whedon accept deposit=true

@jonschwenk
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Awesome. Big thanks to @leotrs, @eriknes for their reviews. Bigger thanks to JOSS and editors like @kbarnhart who provide an awesome platform for scientific developers to announce, share, and get credit for their work. Also thanks whedon!

@kyleniemeyer
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@whedon accept deposit=true

Looks good to me!

@whedon
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whedon commented Mar 10, 2021

Doing it live! Attempting automated processing of paper acceptance...

@whedon whedon added accepted published Papers published in JOSS labels Mar 10, 2021
@whedon
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whedon commented Mar 10, 2021

🐦🐦🐦 👉 Tweet for this paper 👈 🐦🐦🐦

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whedon commented Mar 10, 2021

🚨🚨🚨 THIS IS NOT A DRILL, YOU HAVE JUST ACCEPTED A PAPER INTO JOSS! 🚨🚨🚨

Here's what you must now do:

  1. Check final PDF and Crossref metadata that was deposited 👉 Creating pull request for 10.21105.joss.02952 joss-papers#2138
  2. Wait a couple of minutes to verify that the paper DOI resolves https://doi.org/10.21105/joss.02952
  3. If everything looks good, then close this review issue.
  4. Party like you just published a paper! 🎉🌈🦄💃👻🤘

Any issues? Notify your editorial technical team...

@kyleniemeyer
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Congrats @jonschwenk on your article's publication in JOSS!

Many thanks to @eriknes and @leotrs for reviewing this, and @kbarnhart for editing.

(FYI, the DOI successfully resolves, but it looks like the final PDF is not yet appearing—this should change shortly.)

@whedon
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Author

whedon commented Mar 10, 2021

🎉🎉🎉 Congratulations on your paper acceptance! 🎉🎉🎉

If you would like to include a link to your paper from your README use the following code snippets:

Markdown:
[![DOI](https://joss.theoj.org/papers/10.21105/joss.02952/status.svg)](https://doi.org/10.21105/joss.02952)

HTML:
<a style="border-width:0" href="https://doi.org/10.21105/joss.02952">
  <img src="https://joss.theoj.org/papers/10.21105/joss.02952/status.svg" alt="DOI badge" >
</a>

reStructuredText:
.. image:: https://joss.theoj.org/papers/10.21105/joss.02952/status.svg
   :target: https://doi.org/10.21105/joss.02952

This is how it will look in your documentation:

DOI

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