Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Bump scIB to v1.1.7 #30

Merged
merged 1 commit into from
Jan 16, 2025
Merged

Bump scIB to v1.1.7 #30

merged 1 commit into from
Jan 16, 2025

Conversation

lazappi
Copy link
Contributor

@lazappi lazappi commented Jan 14, 2025

Describe your changes

Increase the version of scib used in components to v1.1.7

Checklist before requesting a review

  • I have performed a self-review of my code

  • Check the correct box. Does this PR contain:

    • Breaking changes
    • New functionality
    • Major changes
    • Minor changes
    • Bug fixes

  • Proposed changes are described in the CHANGELOG.md

  • CI Tests succeed and look good!

@lazappi lazappi requested a review from rcannood January 14, 2025 15:29
rcannood
rcannood approved these changes Jan 15, 2025
View reviewed changes
Copy link
Member

@rcannood rcannood left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

LGTM!

@lazappi lazappi merged commit 058ebf0 into main Jan 16, 2025
11 checks passed
lazappi added a commit that referenced this pull request Jan 16, 2025
@lazappi
Merge remote-tracking branch 'origin/main' into bugfix/no-ref/adjust-…
6e61f08 
…resources

* origin/main:
  Bump scIB to v1.1.7 (#30)
  Pin scPRINT version (#25)
  Increase UCE memory tag (#24)
  Add exit codes helper file (#26)
  Include all features in solution (#28)
  Update common submodule (#29)
@rcannood rcannood deleted the update-scib branch January 17, 2025 12:32
lazappi added a commit to HelloWorldLTY/task_batch_integration that referenced this pull request Jan 27, 2025
@lazappi
Merge remote-tracking branch 'origin/main' into HelloWorldLTY/main
5c6b249 
* origin/main: (28 commits)
  Adjust pyliger dependencies (openproblems-bio#43)
  Minor run adjustments (openproblems-bio#44)
  Fix reference in task description (openproblems-bio#45)
  Remove grouping bottleneck (openproblems-bio#42)
  Retry with single core in geneformer (openproblems-bio#41)
  Adjustments based on benchmark run (openproblems-bio#39)
  Update compute environment (openproblems-bio#35)
  Replace "+" in batch names for liger (openproblems-bio#37)
  Update common submodule to commit 62268aa  (openproblems-bio#38)
  Adjust features filter in scPRINT (openproblems-bio#36)
  minor tweaks to the cell cycle component (openproblems-bio#34)
  Update common submodule to commit a2e845 (openproblems-bio#33)
  Increase time resources (openproblems-bio#27)
  GPU adjustments (openproblems-bio#32)
  Add batch_hvg var column to solution (openproblems-bio#31)
  Add fine-tuned scGPT (openproblems-bio#17)
  Bump scIB to v1.1.7 (openproblems-bio#30)
  Pin scPRINT version (openproblems-bio#25)
  Increase UCE memory tag (openproblems-bio#24)
  Add exit codes helper file (openproblems-bio#26)
  ...
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers

@rcannood rcannood rcannood approved these changes

Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
2 participants
@lazappi @rcannood