fix: removing all duplicated variants in sumstats for finemapping functions #574
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✨ Context
Some sumstats files have duplicated variant rows, where it isn't clear which is the correct entry. This causes errors in the finemapping pipelines, specifically when extracting the gnomad blockmatrix.
🛠 What does this PR implement
adds a few lines to remove ALL variants that appear more than once in the sumstats prior to finemapping.
🚦 Before submitting
dev
branch?make test
)?poetry run pre-commit run --all-files
)?