fix(vep_operator): change dtype for pos to int for correct sorting #38
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Rationale
This PR fixes isssue issue with vep variant annotation operator spotted on batch job, that caused the partitionned vcf files were not sorted correctly before annotating them by vep.
See the exact errors of failed jobs in logs
Fixes
This PR changes the
POS
field in partitionned vcfs toint
so the partitionning is done correctly.