Updates gene_expression.py - changes ADA to ADAR

Failed in previous state, since merge_bilateral etc. wasn't set
openworm · Feb 9, 2024 · c6dc62d · c6dc62d
1 parent b5c94c8
commit c6dc62d
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Showing 2 changed files with 4 additions and 2 deletions.
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -35,7 +35,9 @@ jobs:
     - name: Test some examples      
       if: ${{ matrix.python-version != '3.7' || matrix.runs-on != 'macos-latest' }} # mac + py3.7 requires build of _bz2 module...
       run: |
-        cd scripts
+        cd scripts 
+        python gene_expression.py
+        python cell_lineage_asymmetry.py
         python peptideGPCR_binding.py
         python signalpropagation_kernels.py
         python plot_signal_propagation.py

diff --git a/scripts/gene_expression.py b/scripts/gene_expression.py
@@ -6,7 +6,7 @@
 ASGL = watlas.ids_to_ais("ASGL")
 print(gexp[ASGL])
 
-gexp = watlas.get_gene_expression(gene_names=["npr-1","egl-4"],neuron_ids=["ADA","ADEL"],th=4)
+gexp = watlas.get_gene_expression(gene_names=["npr-1","egl-4"],neuron_ids=["ADAR","ADEL"],th=4)
 print(gexp)
 
 gexp = watlas.cengen.get_expression(gene_wbids=["WBGene00001173"],neuron_ids=["ADA","ADE","ADF","ADL","AFD"],th=2)