Repositories list

• blog.bco-dmo.org

  Public
  BCO-DMO blog

  CSS

  •1•0•6•0•Updated Feb 18, 2025Feb 18, 2025

• bcodmo_data_viewer

  Public
  A react web component to view data

  CSS

  •0•0•0•0•Updated Feb 10, 2025Feb 10, 2025

• migration_scripts

  Public
  General migration scripts

  Python

  •0•0•0•0•Updated Feb 6, 2025Feb 6, 2025

• documentation_public

  Public
  Repo handeling the public facing documentation of BCO-DMO. Currently viewable and adaptable for DM's in gitbook (see link below), but will be pulled in the new website in html in the future (see A. Shepherd for more info). Kanban progress content: https://github.com/orgs/BCODMO/projects/13

  datarepositoryinformation+ 2usabilitybco-dmo

  0•0•23•0•Updated Jan 30, 2025Jan 30, 2025

• METS-RCN-TimeSeries

  Public
  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Jan 30, 2025Jan 30, 2025

• jgofs-TSV-to-CSV

  Public
  Convert JGOFS TSV files to CSV format

  Python

  •0•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• OSPREY-manual-RDF-links

  Public
  links to external RDF resources that haven't been committed to the OSPREY database

  rdfosprey

  0•1•0•0•Updated Jan 16, 2025Jan 16, 2025

• website_files

  Public
  Rich Text Format

  •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• bco-dmo_python_worms

  Public
  Python

  •1•0•0•0•Updated Oct 17, 2024Oct 17, 2024

• FAIR-data-assessment

  Public
  A SHACL implementation over Science-on-Schema.org data graphs for FAIR Data Principles

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Sep 13, 2024Sep 13, 2024

• bcodmo_ontology

  Public
  0•0•0•0•Updated Aug 22, 2024Aug 22, 2024

• bcodmo_frictionless

  Public
  Custom datapackage-pipelines processors for BCODMO

  Python

  •0•5•0•0•Updated Aug 5, 2024Aug 5, 2024

• OSPREY-LTER-Harvest

  Public
  Resources for the LTER metadata harvest

  configurationospreylter

  0•0•1•0•Updated Jun 21, 2024Jun 21, 2024

• redmine_aws

  Public
  Terraform and deployment scripts for redmine on AWS

  Ruby

  •0•0•1•0•Updated Jun 17, 2024Jun 17, 2024

• Ocean-Data-Ontology

  Public
  Application-level ontology for describing oceanographic datasets

  ontologyosprey

  Other

  •4•7•10•0•Updated May 9, 2024May 9, 2024

• tabulator-py

  Public
  Python library for reading and writing tabular data via streams.

  Python

  •

  MIT License

  •42•0•0•0•Updated May 2, 2024May 2, 2024

• Coral-resilience-to-marine-heatwaves

  Public
  Data set and R script for Brown et al. 'Temperature variability does not promote coral resilience to marine heatwaves'

  1•0•0•0•Updated Jan 19, 2024Jan 19, 2024

• SWARM_LCS

  Public
  code for the calculation of Lagrangian coherent structures from HFR observed surface currents in Palmer Deep Canyon

  MATLAB

  •1•0•0•0•Updated Jan 8, 2024Jan 8, 2024

• SWARM_CODAR

  Public
  Fork made for curatorial purposes at BCO-DMO.

  MATLAB

  •1•0•0•0•Updated Jan 8, 2024Jan 8, 2024

• goodtables-ui

  Public
  A web UI for goodtables validation and report visualizations.

  TypeScript

  •7•0•0•0•Updated Nov 30, 2023Nov 30, 2023

• webcomponent_data_viewer

  Public
  Visualize a Frictionless Data Package

  JavaScript

  •1•0•19•0•Updated Oct 10, 2023Oct 10, 2023

• Data-Use-Examples

  Public
  Jupyter Notebook

  •1•1•2•0•Updated Jun 13, 2023Jun 13, 2023

• shacl-masterclass

  Public
  SHACL masterclass at Knowledge Connexions 2020, Knowledge Graph Conference 2021 & 2022.

  8•0•0•0•Updated May 9, 2023May 9, 2023

• schema.geolink.org

  Public
  A static copy of the schema.geolink.org website

  HTML

  •0•0•0•0•Updated Feb 13, 2023Feb 13, 2023

• biogeoscapes

  Public
  The Biogeoscapes website

  SCSS

  •2•0•0•2•Updated Jan 17, 2023Jan 17, 2023

• submission_validation_server

  Public
  A python web server that runs jobs to validate submissions using goodtables

  Python

  •0•0•0•5•Updated Dec 8, 2022Dec 8, 2022

• Labyrinthula

  Public
  R code for microbial community analysis accompanying Schenck, DuBois, Kardish, Stachowicz and Hughes 2021

  R

  •1•0•0•0•Updated Nov 8, 2022Nov 8, 2022

• robot

  Public
  ROBOT is an OBO Tool

  Java

  •

  BSD 3-Clause "New" or "Revised" License

  •75•0•0•0•Updated Aug 18, 2022Aug 18, 2022

• bcodmont

  Public
  Makefile

  •

  Creative Commons Zero v1.0 Universal

  •1•0•17•1•Updated Aug 17, 2022Aug 17, 2022

• workshop_bios_oceanographic_data_reuse

  Public
  HTML

  •

  Other

  •1•0•0•0•Updated Jun 16, 2022Jun 16, 2022