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    64 repositories

    • Data-Explorations

      Public
      Jupyter book to go along with Data Science for Psych & Neuro
      Jupyter Notebook
      •0•1•5•0•Updated Feb 3, 2025Feb 3, 2025

    • DataSciencePsychNeuro

      Public
      Repository for the Data Science for Psychology and Neuroscience course at CMU (Vargas/Verstynen)
      Jupyter Notebook
      •
      GNU Lesser General Public License v3.0
      •56•55•6•0•Updated Jan 30, 2025Jan 30, 2025

    • BiologicallyIntelligentExploration

      Public
      The repository for the CMU class Biologically Intelligent eXploration (BIX).
      Jupyter Notebook
      •11•4•2•0•Updated Nov 22, 2024Nov 22, 2024

    • BIX-book

      Public
      Jupyter book for Biologically Intelligent eXploration
      Jupyter Notebook
      •
      MIT License
      •0•2•0•0•Updated Nov 18, 2024Nov 18, 2024

    • coax_website

      Public
      HTML
      •
      Other
      •2•0•0•0•Updated Sep 30, 2024Sep 30, 2024

    • explorationlib

      Public
      Tools to simulate biological exploration.
      Jupyter Notebook
      •
      Other
      •20•3•0•1•Updated Sep 26, 2024Sep 26, 2024

    • niphlem

      Public
      NeuroImaging-oriented Physiological Log Extraction for Modeling
      neuroimagingphysiological-data
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•3•4•0•Updated Aug 21, 2024Aug 21, 2024

    • CBGTPy

      Public
      Rewrite of a basal ganglia simulator by Matthew Clapp
      Python
      •1•4•18•0•Updated Jul 4, 2024Jul 4, 2024

    • OompletDatasetToolkit

      Public
      Python
      •
      Other
      •0•1•0•0•Updated Jun 20, 2024Jun 20, 2024

    • cofluctuating-task-connectivity

      Public
      Project that explores the similarity of task activation and connectivity measures between MSIT and Stroop tasks. Connectivity is computed using Rick's approach of cofluctuating (or edge) time series
      Jupyter Notebook
      •0•0•1•0•Updated May 15, 2024May 15, 2024

    • ARS

      Public
      An implementation of the Augmented Random Search algorithm
      Jupyter Notebook
      •
      Other
      •102•0•0•0•Updated May 13, 2024May 13, 2024

    • sbp-imt-mediation

      Public
      This project aims to test the existence of an association between stressor-evoked bold activity and carotid artery intima media thickness (CA-IMT) mediated by measures of cardiovascular reactivity
      stressfmrimediation-analysispreclinical-carotid-atherosclerosiscardiovascular-reactivity
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 23, 2024Apr 23, 2024

    • dynamic-hr

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Dec 22, 2023Dec 22, 2023

    • pycombat

      Public
      Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects
      combatdata-harmonization
      Jupyter Notebook
      •
      MIT License
      •6•13•1•0•Updated Oct 30, 2023Oct 30, 2023

    • CBGT

      Public
      Spiking Neural Network of CBGT pathways
      C
      •
      Other
      •5•6•1•1•Updated Aug 1, 2023Aug 1, 2023

    • AdaptiveDecisionMaking_2018

      Public
      Repository for code and lab resources for "Neural and Cognitive Models of Adaptive Decision Making" course (2018)
      Jupyter Notebook
      •
      MIT License
      •6•11•0•0•Updated Jul 20, 2023Jul 20, 2023

    • Reappraisal-of-Neuromarkers-of-Suicide

      Public
      MATLAB
      •0•0•0•0•Updated Feb 13, 2023Feb 13, 2023

    • imaginagents

      Public
      Adaptive imagination-augmented agents for prospective learning
      Python
      •
      MIT License
      •0•0•0•0•Updated Nov 14, 2022Nov 14, 2022

    • CBGTPhenotypes

      Public
      Jupyter Notebook
      •
      Other
      •0•0•0•1•Updated Jun 22, 2022Jun 22, 2022

    • AdaptiveCBGT

      Public template
      Spiking Neural Network of CBGT pathways
      Jupyter Notebook
      •
      Other
      •0•2•0•1•Updated Jun 21, 2022Jun 21, 2022

    • multimodal-imt

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Apr 9, 2022Apr 9, 2022

    • CBGTControlEnsembles

      Public
      Identifying control ensembles for information processing within the cortico-basal ganglia-thalamic circuit
      Jupyter Notebook
      •
      Other
      •1•0•0•0•Updated Jan 24, 2022Jan 24, 2022

    • infomercial

      Public
      Agents who seek information and reward in equal measure.
      Jupyter Notebook
      •
      MIT License
      •0•3•0•0•Updated Dec 9, 2021Dec 9, 2021

    • reappraisal-imt-progression

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Nov 23, 2021Nov 23, 2021

    • DoubleDescentIntoMadness

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 2, 2021Aug 2, 2021

    • glia_playing_atari

      Public
      Artificial Glia Networks.
      Jupyter Notebook
      •
      MIT License
      •1•4•0•0•Updated May 20, 2021May 20, 2021

    • multimodal-predict-cognition

      Public
      Jupyter Notebook
      •1•3•0•0•Updated Dec 22, 2020Dec 22, 2020

    • newremagine

      Public
      New experiences, replay and imagination, titrated, in training
      Python
      •
      MIT License
      •0•1•0•0•Updated Nov 24, 2020Nov 24, 2020

    • DeBaCl

      Public
      Density Based Clustering (DeBaCl) Toolbox
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •28•101•7•3•Updated Sep 1, 2020Sep 1, 2020

    • stable-baselines3

      Public
      PyTorch version of Stable Baselines, improved implementations of reinforcement learning algorithms.
      Python
      •
      MIT License
      •1.7k•0•0•0•Updated Jun 16, 2020Jun 16, 2020