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    54 repositories

    • HolyLabRegistry

      Public
      Julia package registry for the Holy lab at Washington University in St. Louis
      Julia
      •4•17•4•0•Updated Dec 19, 2024Dec 19, 2024

    • FlyThroughPaths.jl

      Public
      Create "fly-throughs" in 3d visualization
      Julia
      •
      MIT License
      •1•11•6•2•Updated Nov 19, 2024Nov 19, 2024

    • GsvdInitialization.jl

      Public
      Discovery of "missing" directions in nonnegative matrix factorization
      Julia
      •
      MIT License
      •0•2•0•1•Updated Nov 18, 2024Nov 18, 2024

    • NMFMerge.jl

      Public
      Merging components in nonnegative matrix factorization
      Julia
      •
      MIT License
      •0•3•0•1•Updated Nov 18, 2024Nov 18, 2024

    • GPCRAnalysis.jl

      Public
      Routines for analysis of protein structures
      Julia
      •
      MIT License
      •1•7•0•1•Updated Aug 28, 2024Aug 28, 2024

    • ImagineInterface.jl

      Public
      Read and write Imagine analog and digital recordings and commands
      Julia
      •
      Other
      •2•2•4•0•Updated Jun 4, 2024Jun 4, 2024

    • RFFT.jl

      Public
      In-place real FFTs for Julia
      Julia
      •
      Other
      •1•2•0•0•Updated Apr 30, 2024Apr 30, 2024

    • RegisterFit.jl

      Public
      RegisterFit contains a number of functions that calculate affine transformations that minimize mismatch. This package is separated from BlockRegistraton
      Julia
      •1•0•1•0•Updated Jan 23, 2024Jan 23, 2024

    • RegisterPenalty.jl

      Public
      This package is separated from BlockRegistraton.
      Julia
      •1•1•1•0•Updated Jan 23, 2024Jan 23, 2024

    • RegisterMismatchCuda.jl

      Public
      This package is separated from BlockRegistraton.
      Julia
      •2•0•0•0•Updated Jan 23, 2024Jan 23, 2024

    • RegisterQD.jl

      Public
      Image registration with the QuadDIRECT optimization algorithm
      Julia
      •
      Other
      •6•14•4•0•Updated Jan 8, 2024Jan 8, 2024

    • RegisterDeformation.jl

      Public
      Representation of spatial deformations
      Julia
      •
      Other
      •4•7•1•0•Updated Jan 8, 2024Jan 8, 2024

    • CenterIndexedArrays.jl

      Public
      Arrays indexed symmetrically around zero
      Julia
      •
      Other
      •0•0•0•1•Updated Jan 8, 2024Jan 8, 2024

    • EconomicChoice.jl

      Public
      Utilities for analyzing neuroeconomic choice experiments
      Julia
      •
      MIT License
      •0•1•0•0•Updated Nov 9, 2023Nov 9, 2023

    • ClusteringBenchmarks.jl

      Public
      Data sets and metrics to evaluate clustering algorithms
      Julia
      •
      MIT License
      •0•5•0•0•Updated Nov 8, 2023Nov 8, 2023

    • GaussianRandomVariables.jl

      Public
      Math (second-order accuracy) with random variables
      Julia
      •
      MIT License
      •0•5•0•1•Updated Oct 12, 2023Oct 12, 2023

    • Imagine

      Public
      A graphical interface for recording with OCPI microscopes.
      C++
      •1•1•17•0•Updated Oct 4, 2023Oct 4, 2023

    • RegisterMismatch.jl

      Public
      This package is separated from BlockRegistraton.
      Julia
      •
      Other
      •3•3•1•0•Updated Sep 29, 2023Sep 29, 2023

    • RegisterMismatchCommon.jl

      Public
      This package is separated from BlockRegistraton.
      Julia
      •
      Other
      •0•0•0•0•Updated Sep 27, 2023Sep 27, 2023

    • RegisterCore.jl

      Public
      Image registration (low-level types and utilities)
      Julia
      •
      Other
      •3•1•0•0•Updated Sep 27, 2023Sep 27, 2023

    • ImaginePlots.jl

      Public
      Plotting of Imagine's hardware signals (complements ImagineInterface)
      Julia
      •
      Other
      •0•1•0•0•Updated Jul 19, 2023Jul 19, 2023

    • Autosampler.jl

      Public
      Code for interfacing Imagine with stimulus delivery
      Julia
      •
      MIT License
      •0•0•1•2•Updated Jun 30, 2023Jun 30, 2023

    • ImagineAnalyses.jl

      Public
      A collection of analyses to run on Imagine signals and images.
      Julia
      •
      Other
      •0•0•0•2•Updated Jul 12, 2022Jul 12, 2022

    • FastScanning.jl

      Public
      Determine camera/laser timing during fast OCPI acquisitions based on measured hardware responses.
      Julia
      •
      Other
      •0•4•0•1•Updated May 30, 2022May 30, 2022

    • OlfactoryTopographicBehavior.jl

      Public
      Utilities for analysis of behavioral experiments on topographic olfaction
      Julia
      •
      MIT License
      •0•0•0•2•Updated May 30, 2022May 30, 2022

    • EcoTrialStructure.jl

      Public
      Data import for experiments on neuroeconomic decision-making
      Julia
      •
      MIT License
      •0•1•0•1•Updated May 30, 2022May 30, 2022

    • RegisterHindsight.jl

      Public
      This package is separated from BlockRegistraton.
      Julia
      •0•0•0•0•Updated Apr 29, 2022Apr 29, 2022

    • StitchDPI.jl

      Public
      Align and stitch pairs of images acquired with a split field of view
      Julia
      •
      Other
      •0•1•0•10•Updated Apr 28, 2022Apr 28, 2022

    • PiezoSerial.jl

      Public
      Control piezoelectric actuators via serial commands
      Julia
      •
      Other
      •0•0•0•1•Updated Apr 28, 2022Apr 28, 2022

    • ImagineWorker.jl

      Public
      Worker thread module for the (WIP) Julia version of Imagine
      Julia
      •
      Other
      •1•0•0•0•Updated Apr 27, 2022Apr 27, 2022