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    7 repositories

    • SIS

      Public
      Coarse-grained molecular dynamics simulation with the Single-Interaction-Site RNA model
      molecular-simulationcoarse-grained-molecular-dynamicsrna-folding
      Fortran
      •
      MIT License
      •0•3•0•0•Updated Dec 24, 2024Dec 24, 2024

    • genesis_cg_tool

      Public
      This project helps you prepare topology and coordinate files for coarse-grained simulations in the MD package GENESIS.
      Julia
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Dec 15, 2024Dec 15, 2024

    • hori-lab.github.io

      Public
      SCSS
      •0•0•0•0•Updated Oct 25, 2024Oct 25, 2024

    • genesis

      Public
      Source, test set, and document for Molecular Dynamics software, GENESIS.
      Fortran
      •
      GNU Lesser General Public License v3.0
      •9•0•0•0•Updated Sep 23, 2024Sep 23, 2024

    • TIS

      Public
      TIS model code
      Fortran
      •0•1•3•0•Updated Aug 9, 2024Aug 9, 2024

    • torchmd

      Public
      End-To-End Molecular Dynamics (MD) Engine using PyTorch
      Python
      •
      MIT License
      •76•0•0•0•Updated May 13, 2024May 13, 2024

    • toml-f

      Public
      TOML parser implementation for data serialization and deserialization in Fortran
      Fortran
      •
      Apache License 2.0
      •24•0•0•0•Updated Jan 13, 2024Jan 13, 2024