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    79 repositories

    • agr_curation

      Public
      CSS
      •
      MIT License
      •1•2•0•2•Updated Oct 9, 2024Oct 9, 2024

    • agr_literature_service

      Public
      Alliance Bibliographic Corpus (ABC) Manager
      Python
      •
      MIT License
      •1•1•0•1•Updated Oct 9, 2024Oct 9, 2024

    • agr_curation_schema

      Public
      Schema repository for the Alliance of Genome Resources persistent data store
      linkmlalliance-curationalliance-of-genome-resources
      Makefile
      •
      MIT License
      •1•7•0•3•Updated Oct 8, 2024Oct 8, 2024

    • agr_pavi

      Public
      AGR Proteins Annotations and Variants Inspector
      CSS
      •
      MIT License
      •0•0•0•15•Updated Oct 8, 2024Oct 8, 2024

    • agr_document_classifier

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 8, 2024Oct 8, 2024

    • agr_java_software

      Public
      Java
      •
      MIT License
      •5•1•0•2•Updated Oct 8, 2024Oct 8, 2024

    • agr_ansible_devops

      Public
      Jinja
      •
      MIT License
      •0•2•0•0•Updated Oct 8, 2024Oct 8, 2024

    • agr_literature_ui

      Public
      This is a react app for displaying information for curation from Alliance resources (Demo)
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Oct 7, 2024Oct 7, 2024

    • agr_blastdb_manager

      Public
      A tool for aggregating and generating Alliance BLAST databases.
      Python
      •
      MIT License
      •0•1•0•0•Updated Oct 4, 2024Oct 4, 2024

    • agr_vep

      Public
      A repository of pipelines for running the EnsEMBL VEP
      Perl
      •3•1•0•0•Updated Oct 3, 2024Oct 3, 2024

    • agr_bluegenes

      Public
      A friendly next-generation interface for Genomic data discovery powered by InterMine
      Clojure
      •
      Other
      •56•0•0•0•Updated Oct 3, 2024Oct 3, 2024

    • agr_ui

      Public
      JavaScript
      •9•14•1•0•Updated Sep 30, 2024Sep 30, 2024

    • agr_blast_service_configuration

      Public
      This repo is used to configure the Alliance Blast Service
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 30, 2024Sep 30, 2024

    • agr_amplify_zfin_jbrowse2

      Public
      Drives the AWS Amplify instance of ZFIN's JBrowse 2
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Sep 25, 2024Sep 25, 2024

    • agr_atp_ontology

      Public
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Sep 25, 2024Sep 25, 2024

    • agr_loader

      Public
      Data loader for the Alliance of Genome Resources website.
      Python
      •
      MIT License
      •5•1•0•1•Updated Sep 24, 2024Sep 24, 2024

    • agr_amplify_jbrowse2

      Public
      Repo to build JBrowse 2 with AWS Amplify
      Perl
      •
      MIT License
      •0•1•0•1•Updated Sep 23, 2024Sep 23, 2024

    • agr_textpresso

      Public
      C++
      •0•0•0•0•Updated Sep 4, 2024Sep 4, 2024

    • agr_genedescriptions

      Public
      Concise gene descriptions generator
      Python
      •
      MIT License
      •3•3•0•0•Updated Aug 31, 2024Aug 31, 2024

    • alliancemine

      Public
      Java
      •
      MIT License
      •4•0•0•0•Updated Aug 29, 2024Aug 29, 2024

    • agr_intermine_builder

      Public
      Build intermine containers required for AllianceMine
      Shell
      •
      MIT License
      •3•0•0•0•Updated Aug 29, 2024Aug 29, 2024

    • agr_mati

      Public
      Minting and Tracking Identifiers (MaTI)
      Java
      •
      MIT License
      •0•2•0•0•Updated Aug 22, 2024Aug 22, 2024

    • agr_jbrowse_vcf

      Public
      Tools for processing VCF data for JBrowse
      Shell
      •
      MIT License
      •0•0•0•0•Updated Aug 16, 2024Aug 16, 2024

    • agr_genedescriptions_reporttool

      Public
      JavaScript
      •
      MIT License
      •4•2•0•3•Updated Aug 15, 2024Aug 15, 2024

    • agr_amplify_zfin_jbrowse1

      Public
      Repo to drive AWS amplify for ZFIN's JBrowse 1 instance
      SCSS
      •
      Other
      •0•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • agr_jbrowse_gff

      Public
      Tools for processing Alliance GFF into JBrowse NCList
      Perl
      •
      MIT License
      •0•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • agr_base_linux_env

      Public
      Dockerfile
      •
      MIT License
      •3•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • agr_preprocess

      Public
      Python
      •
      MIT License
      •3•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • agr_file_generator

      Public
      This repo is for generating files from Alliance resources
      Python
      •
      MIT License
      •3•1•0•1•Updated Aug 14, 2024Aug 14, 2024

    • agr_jbrowse_zfin

      Public
      JBrowse configs and GFF processing tools
      Shell
      •
      MIT License
      •0•0•0•0•Updated Aug 13, 2024Aug 13, 2024