Repositories list

• epiviz.gl

  Public
  Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.

  webglwebworkergenomics-visualization+ 2epivizoffscreencanvas

  JavaScript

  •5•10•17•2•Updated May 24, 2024May 24, 2024

• epiviz.heatmap.gl

  Public
  Heatmap like plots

  webgl2heatmapsdotplots+ 1tickplots

  JavaScript

  •2•4•1•0•Updated Apr 8, 2024Apr 8, 2024

• epivizFileParser

  Public
  Parse and Query Genomic File Formats.

  Python

  •

  MIT License

  •1•2•0•2•Updated Mar 1, 2023Mar 1, 2023

• epiviz-chart

  Public
  Epiviz-chart: Component library for genomic data visualization

  polymerwebcomponentsgenomics+ 3data-visualizationepivizvisualization

  HTML

  •2•5•2•15•Updated Mar 1, 2023Mar 1, 2023

• epiviz

  Public
  EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding of correlations between various genome features.

  visualizationbioinformaticsjavascript+ 2epivizepigenetic-data

  JavaScript

  •

  Other

  •12•68•26•1•Updated Mar 1, 2023Mar 1, 2023

• epiviz-feed-computation

  Public
  backend computational support for epiviz feed results

  Python

  •1•1•0•4•Updated Feb 2, 2023Feb 2, 2023

• efs-genomes

  Public
  0•0•0•0•Updated Feb 1, 2023Feb 1, 2023

• EpivizQuindex

  Public
  Fast Index search across a large collection of genomic files (BigWigs or BigBeds)

  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Sep 2, 2022Sep 2, 2022

• epivizFileServer

  Public
  Python library to query and transform genomic data from indexed files

  apiwebservicegenomics+ 4python3file-servergenomic-data-analysisdask-distributed

  Python

  •

  MIT License

  •4•5•0•4•Updated Aug 6, 2022Aug 6, 2022

• epiviz.js

  Public
  the visualization library that powers Epiviz (www.github.com/epiviz/epiviz)

  0•0•0•0•Updated Aug 4, 2022Aug 4, 2022

• epiviz.scatter.gl

  Public
  yet another scatterplot library

  visualizationscatter-plotwebgl2+ 1offscreencanvas

  JavaScript

  •0•2•2•0•Updated Mar 15, 2022Mar 15, 2022

• epivizrData

  Public
  Data Management API for epiviz interactive visualization app

  R

  •

  Other

  •0•1•0•1•Updated Nov 9, 2021Nov 9, 2021

• epivizrChart

  Public
  epiviz genomic data visualization components to RMarkdown documents

  HTML

  •0•3•1•1•Updated Nov 9, 2021Nov 9, 2021

• shinywc

  Public
  R

  •1•0•0•0•Updated Sep 14, 2021Sep 14, 2021

• epiviz-ws

  Public
  Python api for workspace management in epiviz app

  Python

  •0•1•0•1•Updated Aug 3, 2021Aug 3, 2021

• epivizr

  Public
  Devel branch of epivizr bioconductor package

  R

  •5•9•2•0•Updated Jul 30, 2021Jul 30, 2021

• metavizr

  Public
  R package to manage and visualize metagenomic datasets with metaviz

  rbioconductormetaviz+ 1metegenomic

  R

  •

  Other

  •0•7•0•1•Updated Jul 30, 2021Jul 30, 2021

• data-filter

  Public
  A fast and customizable polymer 2.0 component for filtering arrays.

  HTML

  •1•1•0•0•Updated Jun 3, 2021Jun 3, 2021

• efs_distributed

  Public
  Python

  •

  MIT License

  •1•0•0•1•Updated May 7, 2021May 7, 2021

• epivizrStandalone

  Public
  Run all epiviz components locally

  R

  •

  Other

  •0•2•0•0•Updated Apr 30, 2021Apr 30, 2021

• iSEEu.epiviz

  Public
  Epiviz genome browser in iSEE

  visualizationgenome-browserisee

  R

  •0•0•0•0•Updated Apr 20, 2021Apr 20, 2021

• lit-element-tailwind

  Public
  JavaScript

  •

  MIT License

  •0•0•0•0•Updated Apr 12, 2021Apr 12, 2021

• epiviz-finding

  Public
  TypeScript

  •

  MIT License

  •0•0•0•0•Updated Apr 12, 2021Apr 12, 2021

• epiviz-workspace

  Public
  Workspace Component for Epiviz. (using firebase)

  epivizfirebaseworkspace

  HTML

  •0•0•0•0•Updated Mar 24, 2021Mar 24, 2021

• epiviz.github.io

  Public
  public website for epiviz

  HTML

  •0•0•0•9•Updated Jan 25, 2021Jan 25, 2021

• metaviz-workspaces

  Public
  HTML

  •0•0•0•0•Updated Jan 21, 2021Jan 21, 2021

• epivizrServer

  Public
  R

  •

  Other

  •1•0•1•0•Updated Oct 9, 2020Oct 9, 2020

• landingpage

  Public
  HTML

  •0•0•0•0•Updated Sep 3, 2020Sep 3, 2020

• epiviz-desktop-app

  Public
  Desktop app for epiviz

  desktop-appgenomicsgenomics-visualization+ 1epiviz

  JavaScript

  •

  Creative Commons Zero v1.0 Universal

  •0•10•0•2•Updated Jul 7, 2020Jul 7, 2020

• biccn_cross_species

  Public
  HTML

  •0•1•0•0•Updated Jun 30, 2020Jun 30, 2020