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@reiterlab Translational Cancer Evolution Laboratory

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    5 repositories

    • reiterlablib

      Public
      A collection of different modules providing methods for frequently used computations and visualizations.
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 18, 2022May 18, 2022

    • treeomics

      Public
      Decrypting somatic mutation patterns to reveal the evolution of cancer
      Python
      •
      GNU General Public License v3.0
      •14•55•8•0•Updated Mar 10, 2021Mar 10, 2021

    • ctdna

      Public
      Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding
      genomicscancercancer-evolutionctdnaliquid-biopsies
      Python
      •
      GNU General Public License v3.0
      •5•10•0•0•Updated Jan 8, 2021Jan 8, 2021

    • rootdiversity

      Public
      Jupyter notebooks to calculate the root diversity score (RDS)
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jul 17, 2020Jul 17, 2020

    • tMAD

      Public
      6•0•0•0•Updated Nov 28, 2018Nov 28, 2018