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MsCoreUtils
PublicCore Utils for Mass Spectrometry DataMsBackendMetaboLights
PublicMsBackend allowing to retrieve MS data from the MetaboLights repository.- Low level infrastructure to handle MS spectra
MsIO
PublicSerializing/importing mass spectrometry data objects eventually using language-agnostic formats.- High level functionality to support and simplify metabolomics data annotation.
metabonaut
Public- Quantitative features for mass spectrometry data
SpectraQL
Public- Core utilities for metabolomics.
MsBackendMassbank
PublicMsBackendMsp
PublicMass Spectrometry Data Backend for MSP FilesMsBackendMgf
Public- Creating and using (chemical) compound databases
Chromatograms
PublicRforMassSpectrometry.org
PublicThe R for Mass Spectrometry Initiative home pagestickers
Public- Interfacing R's Spectra package with the Python world.
ProtGenerics
PublicS4 generic functions for Bioconductor mass spectrometry infrastructure- R for Mass Spectrometry documentation
MsBackendTimsTof
PublicSpectra backend supporting TimsTOF data files using the opentimsr package.MsDataHub
PublicMass Spectrometry Data on ExperimentHubPSMatch
PublicPeptide Spectrum MatchingRforMassSpectrometry
Publicdocs
PublicMsFeatures
Publicunimod
PublicAmino acid modifications for mass spectrometryDeprecated-MsBackendSql
Public archive