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@typhoidgenomics Global Typhoid Genomics Consortium

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    6 repositories

    • genotyphi

      Public
      Assign genotypes to Salmonella Typhi genomes based on VCF files (mapped to Typhi CT18 reference genome)
      Python
      •
      GNU General Public License v3.0
      •10•22•0•4•Updated Oct 1, 2024Oct 1, 2024

    • TyphoidGenomicsConsortiumMykrobe

      Public
      HTML
      •0•0•0•0•Updated Oct 1, 2024Oct 1, 2024

    • TyphiNET

      Public
      TyphiNET online Salmonella Typhi AMR surveillance dashboard.
      JavaScript
      •
      GNU General Public License v3.0
      •3•7•0•0•Updated May 14, 2024May 14, 2024

    • .github

      Public
      0•0•0•0•Updated Feb 7, 2024Feb 7, 2024

    • TyphoidGenomicsConsortiumWG1

      Public
      HTML
      •
      GNU General Public License v3.0
      •2•1•0•0•Updated Sep 22, 2023Sep 22, 2023

    • scripts

      Public
      0•0•0•0•Updated Aug 12, 2023Aug 12, 2023