Repositories list

• biobear

  Public
  Work with bioinformatic files using Arrow, Polars, and/or DuckDB

  pythonbioinformaticsbiology+ 7arrowbiopythonsamtoolspyarrowrust-bioduckdbpolars

  Rust

  •

  MIT License

  •8•163•9•5•Updated Nov 8, 2024Nov 8, 2024

• exon

  Public
  Exon is an OLAP query engine specifically for biology and life science applications.

  rustbioinformaticssql+ 4arrowngsproteomicsdatafusion

  Rust

  •

  Other

  •3•52•11•6•Updated Oct 29, 2024Oct 29, 2024

• biobear-feedstock

  Public
  A conda-smithy repository for biobear.

  BSD 3-Clause "New" or "Revised" License

  •2•0•0•0•Updated Mar 21, 2024Mar 21, 2024

• exon-duckdb

  Public
  DuckDB Extension for working with bioinformatic data.

  C++

  •

  Other

  •2•10•0•1•Updated Oct 18, 2023Oct 18, 2023

• staged-recipes

  Public
  A place to submit conda recipes before they become fully fledged conda-forge feedstocks

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •5k•0•0•0•Updated Jul 24, 2023Jul 24, 2023

• wheretrue.r-universe.dev

  Public
  0•0•0•0•Updated Jul 5, 2023Jul 5, 2023

• fasql

  Public archive
  DuckDB Extension for reading and writing FASTA and FASTQ Files

  bioinformaticsfastafastq+ 1duckdb

  C++

  •

  MIT License

  •3•20•1•0•Updated Jun 19, 2023Jun 19, 2023