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Bp5 stream #3071

Merged
merged 2 commits into from
Feb 23, 2022
Merged

Bp5 stream #3071

merged 2 commits into from
Feb 23, 2022

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pnorbert
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@pnorbert
Fix bpls when calculating get_global_array_signature() to not segfaul…
b62a946 
…t on steps that don't have the variable.

Previously it failed to list content of file generated by test Test.Engine.BP.WriteReadAsStreamADIOS2.Serial
@pnorbert
Added support for streaming read for BP5
1113a93
@pnorbert pnorbert merged commit fe5814a into ornladios:master Feb 23, 2022
@pnorbert pnorbert deleted the bp5-stream branch February 23, 2022 21:49
chuckatkins pushed a commit to chuckatkins/ADIOS2 that referenced this pull request Mar 29, 2022
nlohmann_json 2022-01-03 (4f8fba14)
90a7f69 
Code extracted from:

    https://github.com/nlohmann/json.git

at commit 4f8fba14066156b73f1189a2b8bd568bde5284c5 (master).

Upstream Shortlog
-----------------

Alex Beregszaszi (1):
      83491801 Fix spelling (ornladios#3125)

Alexander Karzhenkov (9):
      42a9dc0b Improve json_ref implementation
      8247a217 Disrupt all C++17 tests to check if they are executed
      aae0e495 Fix travis configuration to enable C++17 tests
      39b8d6bd Restore intentionally disrupted C++17 tests
      cd7acc1d Include <string_view> in "nlohmann/json.hpp" when C++17 is used
      9493f4be Advance gcc library version for clang++-7
      7092890f Properly select the build type for Travis
      10db9184 Configure Travis to build "Release" instead of "Debug"
      903b8a6e Build as "Debug" for coverage test

Amir Masoud Abdol (3):
      8e4996c1 Updating the Homebrew Command
      b65748f7 Using the homebrew/core Formula
      14af5d4a fixing the doc files

Anthony VH (18):
      1e825e4f Add support for deserialization of STL containers of non-default constructable types (fixes ornladios#2574).
      c0a8b45b Renamed template parameter and added some comments.
      1b113f73 Added extra tests to improve coverage.
      23f462b5 Reduced code duplication, renamed tag to identity_tag.
      672e8bfc Fixed std::pair trying to deserialize via array functions.
      6ebf274c Add internal version of is_default_constructible to work around LWG 2367.
      6278f31d Simplify from_json overloads.
      6ef1614f Refactor json::get() to use priority_tag.
      fc8c5842 Regenerated single include.
      fbf6df63 Enable member function calls in trailing return decltype expressions for older compilers.
      d7c0f157 Merged from_json for pair and tuple to try to fix C2995 error in old MSVC versions.
      6eb37e9b Only add conditional constexpr to get() for >= C++14 to work around errors on older compilers.
      848927ae Updated comments as requested.
      130382f2 Remove comment about GCC commit which didn't really relate to the code.
      322bc99d Reran amalgamate.
      8e79917d Fix clang-tidy complaints.
      2b865131 Fixing CI errors.
      58b83b71 Set parent pointers for values inserted via update() (fixes ornladios#3007). (ornladios#3008)

Arseniy Terekhin (1):
      355fa6c3 🚨 gdb_pretty_printer failure on basic types

Benjamin A. Beasley (1):
      ef826b6f Update doctest from 2.4.4 to 2.4.6 (fixes ornladios#2686)

Carl Smedstad (1):
      62f2997b Fix assertion failure for JSON_DIAGNOSTICS (ornladios#3037)

Cristi Vîjdea (1):
      f5b3fb32 Fix typos in operator[] documentation (ornladios#3102)

Daniel Albuschat (1):
      ee1208aa Docs: Update `skip_comments` to `ignore_comments` (ornladios#3145)

David Pfahler (9):
      1a1381f0 Fixes ornladios#2728
      31c4c8f3 Fixes ornladios#2730
      38952643 generate amalgation to fix CI for ornladios#2730
      6b267e3c fixed amalgation file for ornladios#2730
      0a2de2f5 fixed amalgation file for ornladios#2728
      5a77314c replaced define
      d140a1c7 fixed amalgamation file
      ae9bbbc9 include io only if JSON_NO_IO is not set for ornladios#2728
      e939b596 fixed amalgation file for ornladios#2728

Dirk Stolle (1):
      fe230334 fix typos in documentation (ornladios#3140)

Doron Behar (1):
      53a9850e pkg-config.pc.in: Don't concatenate paths

Ferry Huberts (6):
      44d60f8d All: fix warnings when compiling with -Wswitch-enum
      832cee5b Adjust warnings flags, as requested
      e7a69b8d Adjust more files after actually building like the CI
      95b73bcd Forgot to amalgate
      364a21be Add coverage exclusion comments, as requested
      cdbc50b9 Again forgot to amalgate (sigh)

Fraser (1):
      90d51b92 Update parse_exceptions.md

Giovanni Cerretani (1):
      28a16972 Fix -Wunused warnings on JSON_DIAGNOSTICS  (ornladios#2976)

Jaakko Moisio (1):
      467f622c Fix compilation of input_adapter(container) in edge cases

Jason Dsouza (2):
      6d7959e0 Keep consistent formatting
      f118091e Update CMakeLists.txt

Jean-Philippe Lemieux (1):
      afbb84b2 Add a cmake option to use SYSTEM in target_include_directories

Joseph Blackman (1):
      9f45d314 Apply suggestions from code review

Jun Jie (1):
      41a99567 fix cmake script overwriting compiler path

Krylov Yaroslav (4):
      5155cc2c Ranged insert test section is added in unit-ordered_json.cpp
      972c15f2 ordered_map::insert(InputIt first, InputIt last) is added
      6390fca7 Doctest is updated to v2.4.1
      a1772743 Doctest is updated to v2.4.3

Louis Dionne (1):
      b0e5965d Properly constrain the basic_json conversion operator

Maarten Becker (1):
      825d3230 Fix: Warning for shadowed variables (ornladios#3188) (ornladios#3193)

Martin Stump (4):
      5c589dd1 Add MAIN_PROJECT check for test and install options
      79050888 Set MAIN_PROJECT=OFF initially
      ea759d03 Compare to CMAKE_CURRENT_SOURCE_DIR for main project check
      1771e924 Remove comment on CTest inclusion

Morten Fyhn Amundsen (1):
      193bf9d6 Fix typo in README

Niels Lohmann (259):
      824d55bf 📝 fix documentation ornladios#1668
      4080d0b1 ✅ add test to compile without exceptions
      dd8cb2ac 🚨 remove -Wimplicit-fallthrough warning ornladios#2348
      411fc324 ⬆️ Hedley 14 (dev branch)
      9d726c25 ♻️ remove "#define private public"
      fe89049a 📝 add more API documentation
      874f49e9 📝 add more API documentation
      178125ff 📝 add docset
      d360fec2 📝 add offline pages for docset
      ce6adc44 📝 add more API documentation
      dd2fb3b4 📝 add more API documentation
      29842026 🚚 remove quotes from filename to fix Windows build
      6674561d 📝 add more API documentation
      0356e0c7 📝 add more API documentation
      f6c2947f 📝 add more API documentation
      fb8adb8e 👷 ignore gh-pages branch in CircleCI
      0c208882 👷 ignore gh-pages branch in CircleCI
      1ce0ed5a 👷 ignore gh-pages branch in CircleCI
      d8ed98a7 📝 add more API documentation
      fb5c2013 📝 add more API documentation
      a430d25f 📝 add more API documentation
      5c4cc20e 📝 add more API documentation
      6b04f05e 📝 add more API documentation
      fe507a7e 🚚 remove < from filename to fix Windows build
      3be6ee35 🚚 remove < from filename to fix Windows build
      b386f4de 📝 fix and extend documentation of discarded values
      9d81eedb 📝 fix and extend documentation of discarded values
      d9843fc9 📝 add note for Intel compilers ornladios#2346
      1047d09b ✅ annotate non-reproducible tests ornladios#2324
      1bcabd9e 📝 fix URLs to documentation
      fd7a9f60 💰 add sponsor
      eaac9180 👷 remove clang9 CI
      3322c9df 🔒 use HTTPS
      d8d8cbf6 🔨 fix site URL
      fc4040ce 🔨 clean up CI
      d028eff9 📦 add license to include.zip ornladios#2487
      85ffc85a 🎨 amalgamate code
      467986fe ♻️ do not unconditionally redefine C++14 constructs
      94d177e0 📄 clarify license
      5cc5285f 🚨 fix shadowing warning
      c026e1a4 🚨 fix warnings
      f15d4475 🚨 fix warnings
      dfedefb9 🚨 fix warnings
      5dd06714 🐛 allow parsing from std::byte containers ornladios#2546
      7b98df51 ✅ add regression test
      433da313 ⚗️ try to use GCC 10
      ca51dc62 ⚗️ try to use Clang 10
      91d7aa57 ⚗️ add C++20 build
      77be4f6a ⚗️ add C++20 build
      e4fc5984 ⚗️ add C++20 build
      4402176d ✅ add regression test
      c8866467 🚨 fix warning
      bdb2469c 🚨 fix warnings
      fc7e181c ⚗️ fix string representation
      00e3f69a ⬆️ update Doxyfile for doxygen 1.9.0
      1587acdb 📝 adjust wording
      a4d491e2 🚧 better diagnostics
      7b047861 🚧 add diagnostics to exceptions
      ecaab32e 🚧 add switch for diagnostics
      c6e7fa21 🚧 fix preprocessor check
      09cd4ed1 🚧 fix preprocessor check
      7323a8eb 🚧 add tests
      ec0b1798 🚧 implement more parent relations
      294fa343 🐛 fix bug in move constructor
      085d497b 📄 update copyright year
      01f6b2e7 📄 update copyright year
      ddc3bb19 👌 remove unnecessary assignment from destructor
      0617bd24 👌 fix operator[]
      04a0a071 👌 fix move constructor and move assignment
      e4af1ddb 👌 fix operator[]
      d4a91b74 👌 clean operator[]
      43cd5c8a 👌 fix constructor
      e1607490 ♻️ move diagnostic code in header
      a8340452 🚨 fix warnings
      1d6ba22f ♻️ simplify code
      9d0150c2 ♻️ simplify code
      ff57bdcc 🐛 fix invariants
      14be8c69 💰 add sponsor
      b9d3aa40 ♻️ split set_parent function
      a7762168 📝 fix comment
      0d1fb383 👌 address comment
      f8037660 ♻️ add iterator set_parent function
      b0d8628c 👌 address comments
      7633a21e 💚 fix build
      29f7abf5 🚨 fix format-truncation warning ornladios#2572
      e9d64113 🐛 proper JSON Pointer escape in diagnostic messages
      aeecc09b ✅ add tests for diagnostics
      e23af743 🚨 fix warnings
      65107f7c 💚 fix build
      5ec09805 💚 fix build
      33379684 ✅ improve coverage
      d6ff059a 👌 addressed review comments
      51ac6000 ✅ improve coverage
      d00ad33e 📝 update documentation
      42218cac ⚗️ try 9 bytes
      7b7da08f 📝 update documentation
      312a9988 🚸 add GDB pretty printer
      380a613f 🐛 fix bug in diagnostics_t
      c190a72f 👌 apply suggestion
      e8dba10f ✅ add test
      74cc0ab4 ♻️ remove diagnostics_t class
      524eea58 👌 remove unused template parameter
      3b63a472 🚨 suppress warning
      ffdeb774 🚨 fix warnings ornladios#2615
      5b0c8046 🐛 properly assign two labels to one test case ornladios#2596
      9f6b78ee 📝 add documentation
      6d4eed5a 🚨 fix warning
      56a6dec0 🔀 merge develop branch
      bb90e34d ⬆️ Hedley v15
      6f551930 🚨 add new CI and fix warnings (ornladios#2561)
      ca9a1f2f 📝 add note to outdated exceptions
      41dbd503 📄 use code from Google Abseil
      9d573511 🐛 set correct value for JSON_ImplicitConversions in ci_test_noimplicitconversions
      c591b6ca 👷 move some MSVC jobs from AppVeyor to GitHub Actions
      1f1fa9f3 🔥 remove some Travis builds
      f2680359 👷 consolidate CI
      ae99a31b 🚧 add more CI tests
      077fe41a 🚧 do not check pushes to non-default branches
      d927f445 💚 fix build
      10fc5162 ⬆️ use Clang 12 where available
      0638a27e 👷 add step for Infer
      608fbffc 📝 update compiler versions
      52717b74 👷 add clang 11
      f6e9654a 🔇 suppress unsigned integer warnings
      cdfe8654 📝 add documentation for numbers
      d0ab2b86 📝 update documentation
      b08139ea ♻️ replace EOF with std::char_traits<char>::eof()
      1d8869f8 👷 add Drone CI
      77a5cd24 🔧 build cmake
      a6e2fd1b 🔧 use built CMake
      27a71ccd 🔧 fix path
      9ec8f4ef 🔧 fix ctest path
      f3193e1e 🔧 build ctest
      42f25122 🔧 skip slow tests
      e6e73095 👷 arm and arm64
      df6fa6c1 👷 arm and arm64
      9746f72d 🔨 do not check certificate
      3685dbdc 🔧 checkout cmake via git
      c73bd8b2 🔧 ignore certificate
      0c62748b 🔧 change repository
      014724f3 ⚗️ change path
      a44b29ec 🔧 fix paths
      e856b507 🔥 remove arm build
      7cafc5c6 📝 document Drone CI
      311730bc 👷 add C++ standards to macOS matrix ornladios#2491
      9f5ee3f1 👷 fix syntax
      2b685c74 👷 reduce load
      30e52eb0 👷 execute all tests
      032f32eb 👷 add Clang 12
      802895b4 👷 remove Clang 10
      71fd9bd9 📝 fix documentation (ornladios#2845)
      5c8d0af5 📝 add comment for handling of negative zeros ornladios#2854
      a82f66be 📝 document JSON_NO_IO macro ornladios#2842
      7442c246 🚨 suppress missingReturn warnings
      24968803 ⚗️ fix coverage
      d40e98ec 🐛 fix assertion failure ornladios#2838
      b0730f29 🐛 fix logics
      bc7e8faa 🔥 remove duplicated line
      3bb94670 ♻️ move capacity check to set_parent function
      a711e1f5 🚨 fix warnings
      db980739 ✅ add regression test
      149ded85 ♻️ simplify destroy() function for primitive types
      6cbdc839 🐛 fix leak for strings
      c1298e69 🐛 fix leak for strings
      0f8666ec 🐛 fix leak for strings
      0011cd1b 🐛 fix leak for strings
      f6863e06 🐛 fix leak for all types
      ecaac226 💡 add comment to describe j.m_value.destroy(j.m_type) calls
      3e4723a4 🔨 remove noexcept annotation
      953dcfb6 🚨 fix warning ornladios#2572
      b7cc4708 ⚡ avoid string in case of empty objects
      c65369ac 👷 fix Codacity badge
      835749ef ✅ add test for JSON_SystemInclude flag
      fb1ee4f9 📝 update documentation
      3db8903f 📝 restructure README
      a0863b8c 📝 add support section
      926fab47 📝 fix GIF examples ornladios#2457
      7066ab12 🎨 reindent code
      45016c44 ⬆️ update Doxyfile
      03270ef0 👥 update contributors
      eba82ecd Refactor Unicode tests (ornladios#2889)
      19a5e121 CMake cleanup (ornladios#2885)
      1c030ccc ✅ add regression test ornladios#2824
      2c030bac ✅ add regression test ornladios#2824
      7feb2c20 🚨 fix useless-cast warnings
      c7822840 ✅ add regression test ornladios#2824
      9a459e1b 🚨 fix useless-cast warnings
      f4716a0d 🚨 fix useless-cast warnings
      8676f674 ✅ add regression test ornladios#2824
      a5440329 📄 add CITATION file
      5a1bc76f ⚗️ switch off exceptions
      c3df4ffd 🚨 fix warning
      eb488bb4 📝 add note for wstring handling
      7c19aa22 ♻️ overwork byte_container_with_subtype
      3eb1fb6b ♻️ change type of binary subtype
      046df035 ♻️ change type of binary subtype
      b7db1d68 ♻️ fix CBOR and BSON
      51a98800 ✅ add tests for CBOR
      89c98dfc ✨ add option to process binary subtypes in CBOR
      b74474e3 💚 fix MSVC build
      176e9bf0 ✅ add tests for CBOR
      c5928501 💚 fix MSVC build
      346c9c1a 💚 fix MSVC build
      a4c3cf77 💚 fix MSVC build
      db7ccafb 💚 fix MSVC build
      523f7c2c 💡 update documentation
      83c005f8 ⚗️ try minimal example
      36394cc2 ⚗️ try minimal example
      0d530c9d ⚗️ try minimal example
      edc203a8 ⚗️ try minimal example
      26569f8e ⚗️ try minimal example
      b792bf56 ⚗️ try minimal example
      68d8661f 📝 update documentation
      e20f3f95 🚨 guard GCC pragmas ornladios#2924
      e65db834 ⚗️ add -WX flag to MSVC builds
      789280fc 🚨 fix C4309 warning
      fecb0185 ⚗️ add -WX flag to MSVC builds
      288cdf9a ⚗️ add -WX flag to MSVC builds
      4b0e04eb 🚨 fix C4100 warnings
      1aceeff3 🚨 fix C4244 warning
      09237272 👥 update documentation
      fa5d3b5a 👷 run CI for release branches
      f1e63a83 👷 run CI for release branches
      8cae9d7c Overwork warning flags (ornladios#2936)
      1de378f5 🔖 set version to 3.10.0
      5d3ad31d 🔥 remove outdated json_unit binary
      54d9cd5a 🔧 guard tests with JSON_Install flag
      cfb71ad1 🐛 adding missing header
      f79bed6d 👷 avoid duplicate AppVeyor builds
      23e3b622 📝 add documentation for integration via vcpkg
      55281e03 📝 add documentation for integration via vcpkg
      e8e93ee4 👷 update Travis badge
      97c7a35a ✅ add regression test
      f03127eb Set stack size for some unit tests when using MSVC (ornladios#2961)
      c753165d Fix parent update for diagnostics with ordered_json (ornladios#2963)
      34e2c4ab 📝 add link to Homebrew package (ornladios#2966)
      8ad66e91 🔖 set version to 3.10.1
      33b674b4 🔖 set version to 3.10.2
      e0b02c35 Use new Docker image (ornladios#2981)
      fd0aa4fb 👷 re-add Clang 12 (ornladios#2986)
      bbdb29c6 Update docset generation script (ornladios#2967)
      0b345b20 Allow allocators for output_vector_adapter (ornladios#2989)
      ea528bbf 📝 fixed Clang version (ornladios#3040)
      ab6a2c74 🔖 set version to 3.10.3
      ba046e4e Allow to use get with explicit constructor (ornladios#3079)
      80cf9d70 Revert invalid fix (ornladios#3082)
      a09bfa5f 🔖 set version to 3.10.4
      c4a4e672 📝 add examples for parsing from iterator pair (ornladios#3100)
      7440786b Update CI (ornladios#3088)
      5d87c4d4 Add recursive update function (ornladios#3069)
      5c08a52f ♻️ overwork std specializations (ornladios#3121)
      e9f88c2f Add missing erase(first, last) function to ordered_map (ornladios#3109)
      6d311592 Add C++17 copies of the test binaries (ornladios#3101)
      29cd970b Consolidate documentation (ornladios#3071)
      e6bf789f ⬆️ update cpplint (ornladios#3225)
      1aca6cb9 Add build step for NVCC and fix a warning (ornladios#3227)
      926df56d 🔥 remove Travis CI ornladios#3087 (ornladios#3233)
      b69713c3 Fix compilation error with NVCC (ornladios#3234)
      b5364faf 🔖 set version to 3.10.5

Pierre Hallot (1):
      43360484 Fix extra ";" clang warnings

Prince Mendiratta (1):
      76030463 Fix FAQ hyperlink typo in readme (ornladios#3148)

Rafail Giavrimis (1):
      b7e493e9 Specified git branch for google benchmark fetch

Remy Jette (1):
      0a9ec38f Remove HEDLEY annotation from exception::what()

Ronak Buch (1):
      67d822d9 Fix typos in documentation

Sergey Linev (2):
      71cb7d12 Change argument name "subtype" in byte_container_with_subtype
      30dd0c0f Change underscore placement

Sven Fink (3):
      095aae19 Supress -Wfloat-equal on intended float comparisions
      353d5971 Add more suppressions on float comparisons
      3f5545f9 Remove -Wfloat-equal suppressions on tests

Théo DELRIEU (2):
      80df5e8d meta: fix is_compatible/constructible traits (ornladios#3020)
      0e694b40 fix std::filesystem::path regression (ornladios#3073)

TotalCaesar659 (1):
      9a599ae6 Update URLs to HTTPS

William A. Wieselquist (1):
      567e2e34 Fix missing 1.78 in example in README.md

abbaswasim (1):
      ddbdb658 Fix amount of entries in the json object

bl-ue (1):
      c9d325b6 readme: fix tilde character display

jbzdarkid (1):
      64ff1cf9 Add asserts to suppress C28020

justanotheranonymoususer (3):
      9710108d Consistency with `using` in README.md
      c3d7fcb7 Update README.md
      e970f310 Update arbitrary_types.md

leozz37 (1):
      b273f28d 📝  add CPM.Cmake example

mb0202 (1):
      7194245a Fixed typo in parse.md (ornladios#2968)

offa (1):
      7935a683 link to conan package in readme

raduteo (2):
      e8dbd7be Update json.hpp
      35d79203 Update json.hpp
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@pnorbert