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SciLifeLab/Stockholm University
- Stockholm, Sweden
- in/jakuborzechowskiwestholm
- https://scholar.google.com/citations?user=P6xI0YEAAAAJ
Popular repositories Loading
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circRNA_finder
circRNA_finder PublicPipeline for finding circular RNAs from RNA-seq data, based on STAR. Used in (Westholm et al, Cell Reports, 2014).
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piq-single
piq-single PublicPIQ DNA footprinting. Cloned from https://bitbucket.org/thashim/piq-single
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cedernaes2018_analysis
cedernaes2018_analysis PublicAnalysis of RNA-seq and DNA methylation data for paper by Cedernaes et al. 2018
HTML 1
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R_genomics_intro
R_genomics_intro PublicSome toy examples in R, illustrating tools for genomics.Part of presentation in R user group meetup
R
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clusterflow
clusterflow PublicForked from ewels/clusterflow
A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
Perl
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OnPLS
OnPLS PublicForked from tomlof/OnPLS
OnPLS: Orthogonal Projections to Latent Structures in Multiblock and Path Model Data Analysis
Python
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