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v1.2.0
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@oschwengers oschwengers released this 31 Oct 10:39
· 52 commits to master since this release
v1.2.0
ff6da9f

This is a new version providing new features, enhancements and bugfixes:

Features

  • Added an option to skip characterization/comparative analysis steps
  • Enhanced the Docker shell script (asap-docker.sh) (more options, use user:group file ownerships)
  • Replaced RDP 16S db by SILVA
  • Added classification of all detected and valid 16S sequences in taxonomic classification
  • Added a 'debug' option for better on-site/remote debugging

Updates & Enhancements

  • Updated PubMLST to 2019-10-02
  • Updated CARD db to 3.0.5 and RGI to 5.1.0
  • Updated VFDB to 2019-10-02
  • Discarded unnecessary dependencies from Docker image
  • Applied several bugfixes and minor improvements to report pages

As the ASA³P directory (databases & 3rd party tools) is too big to upload it on GitHub, we provide them on our own servers. Download URLs for all necessary files are given in the readme: https://github.com/oschwengers/asap#availability

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