fix: Split build system config by tools, fix typos, and fix the `defa… #1370
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| name: main | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| jobs: | |
| check-branch: | |
| if: ${{ github.event_name == 'pull_request' }} | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 2 | |
| concurrency: | |
| group: check-pr-${{ github.ref }} | |
| cancel-in-progress: true | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Check if the PR's branch is updated | |
| uses: osl-incubator/gh-check-pr-is-updated@1.0.0 | |
| with: | |
| remote_branch: origin/main | |
| pr_sha: ${{ github.event.pull_request.head.sha }} | |
| tests: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: | |
| - "ubuntu" | |
| - "macos" | |
| - "windows" | |
| runs-on: ${{ matrix.os }}-latest | |
| concurrency: | |
| group: ci-main-tests-${{ matrix.os }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Cache Conda packages | |
| uses: actions/cache@v4 | |
| with: | |
| path: ~/.conda/pkgs | |
| key: conda-${{ runner.os }}-${{ hashFiles('**/conda*.yaml') }} | |
| restore-keys: | | |
| conda-${{ runner.os }}- | |
| - name: Install dependencies with conda for linux/macos | |
| uses: conda-incubator/setup-miniconda@v3 | |
| if: ${{ matrix.os != 'windows' }} | |
| with: | |
| miniforge-version: latest | |
| environment-file: conda/dev.yaml | |
| channels: conda-forge,nodefaults | |
| activate-environment: scicookie | |
| auto-update-conda: true | |
| conda-solver: libmamba | |
| - name: Install dependencies with conda for windows | |
| uses: conda-incubator/setup-miniconda@v3 | |
| if: ${{ matrix.os == 'windows' }} | |
| with: | |
| miniforge-version: latest | |
| environment-file: conda/dev-win.yaml | |
| channels: conda-forge,nodefaults | |
| activate-environment: scicookie | |
| auto-update-conda: true | |
| conda-solver: libmamba | |
| - name: Check poetry.lock | |
| run: poetry check | |
| - name: Install dependencies | |
| run: | | |
| poetry config virtualenvs.create false | |
| poetry install | |
| - name: Run tests | |
| if: ${{ matrix.os != 'windows' }} | |
| run: makim tests.unit | |
| - name: Run tests | |
| if: ${{ matrix.os == 'windows' }} | |
| run: pytest -s -vv --template src/scicookie tests | |
| # - name: Semantic Release PR Title Check | |
| # uses: osl-incubator/semantic-release-pr-title-check@v1.4.3 | |
| # if: success() || failure() | |
| # with: | |
| # convention-name: conventionalcommits | |
| linter: | |
| runs-on: ubuntu-latest | |
| concurrency: | |
| group: ci-main-linter-${{ github.ref }} | |
| cancel-in-progress: true | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Cache Conda packages | |
| uses: actions/cache@v4 | |
| with: | |
| path: ~/.conda/pkgs | |
| key: conda-${{ runner.os }}-${{ hashFiles('**/conda*.yaml') }} | |
| restore-keys: | | |
| conda-${{ runner.os }}- | |
| - name: Install dependencies with conda for linux/macos | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniforge-version: latest | |
| environment-file: conda/dev.yaml | |
| channels: conda-forge,nodefaults | |
| activate-environment: scicookie | |
| auto-update-conda: true | |
| conda-solver: libmamba | |
| - name: Install dependencies | |
| run: | | |
| poetry config virtualenvs.create false | |
| poetry install | |
| - name: Run style checks | |
| run: | | |
| pre-commit install | |
| makim tests.lint | |
| smoke-test: | |
| runs-on: ubuntu-latest | |
| concurrency: | |
| group: ci-main-smoke-${{ matrix.smoke_file }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| smoke_file: | |
| - automation.sh | |
| - auto-format-tools.sh | |
| - build-systems.sh | |
| - ci.sh | |
| - containers.sh | |
| - docs-jupyter-book.sh | |
| - docs-mkdocs.sh | |
| - docs-quarto.sh | |
| - docs-sphinx.sh | |
| - files.sh | |
| - linters.sh | |
| - tests.sh | |
| - virtual-envs.sh | |
| - cli.sh | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniforge-version: latest | |
| environment-file: conda/dev.yaml | |
| channels: conda-forge,nodefaults | |
| activate-environment: scicookie | |
| auto-update-conda: true | |
| conda-solver: libmamba | |
| - name: Install dependencies | |
| run: poetry install | |
| - name: Run Smoke Test (${{ matrix.smoke_file }}) | |
| run: bash ./tests/smoke/${{ matrix.smoke_file }} |