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fix update storage logic to take into account config file (#554)
With v15 to v16 upgrades, we started seeing failures updating storage of non-mainnet networks. We reported upstream: https://gitlab.com/tezos/tezos/-/issues/4892#note_1287844009 However it turns out that the data dir we were passing did not have a config file, so it was unable to figure out which network the data dir was for. This is fixed by passing config file instead of data dir. I tried by launching v15 ghostnet from a snapshot, then upgrading to v16. I also tried launching a v16 tarball directly from scratch. Both worked. test
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