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Common Classes and Data Structures for Geometry Vectors

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geovctrs

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The goal of geovctrs is to provide a common set of classes and data structures to ensure that processing functions in the rapidly expanding R geospatial ecosystem are interchangeable.

Installation

You can install the development version from GitHub with:

# install.packages("remotes")
remotes::install_github("paleolimbot/geovctrs")

If you can load the package, you’re good to go!

library(geovctrs)

Geometry vectors

This package provides vctrs class definitions several simple geometries that can be efficiently stored using column vectors (geo_xy(), geo_xyz(), geo_segment(), and geo_rect()). Well-known geometry (well-known binary and well-known text) vectors from the wk package are used for generic geometries. These classes are designed to work with dplyr, tidyr, and other tidyverse packages that use vctrs. In addition to providing default implementations of generics, they have print, plot, and coercion methods so that they “just work” when you need them to.

head(geo_example_wkt)
#> <wk_wkt[6]>
#> [1] <NA>                                   
#> [2] POINT (30 10)                          
#> [3] POINT EMPTY                            
#> [4] POINT Z (1 1 5)                        
#> [5] MULTIPOINT ((10 40), (40 30), (20 20...
#> [6] MULTIPOINT EMPTY
head(as_wkb(geo_example_wkt))
#> <wk_wkb[6]>
#> [1] <NA>                                     
#> [2] <POINT (30 10)>                          
#> [3] <POINT (nan nan)>                        
#> [4] <POINT Z (1 1 5)>                        
#> [5] <MULTIPOINT ((10 40), (40 30), (20 20...>
#> [6] <MULTIPOINT EMPTY>

Constructing and destructing geometries

The geovctrs package provides functions to construct geometries from coordinates, and destruct geometries to extract their coordinates.

# construct linestrings
linestrings <- c(
  geo_linestring(geo_xy(c(1, 2, 5), c(0, 1, 2))),
  geo_linestring(geo_xy(c(10, 20, 50), c(0, 10, 20)))
)

linestrings
#> <wk_wksxp[2]>
#> [1] <LINESTRING (1 0, 2 1, 5 2...>      <LINESTRING (10 0, 20 10, 50 20...>

# destruct to get coordinates
geo_coordinates(linestrings)
#> # A tibble: 6 x 4
#>   feature  part  ring      xy
#>     <int> <int> <int>    <xy>
#> 1       1     1     0   (1 0)
#> 2       1     1     0   (2 1)
#> 3       1     1     0   (5 2)
#> 4       2     2     0  (10 0)
#> 5       2     2     0 (20 10)
#> 6       2     2     0 (50 20)

You can use separate_xy() get the actual x and y values (and unite_xy() to create a geo_xy() column).

separate_xy(geo_coordinates(linestrings), "xy")
#> # A tibble: 6 x 5
#>   feature  part  ring     x     y
#>     <int> <int> <int> <dbl> <dbl>
#> 1       1     1     0     1     0
#> 2       1     1     0     2     1
#> 3       1     1     0     5     2
#> 4       2     2     0    10     0
#> 5       2     2     0    20    10
#> 6       2     2     0    50    20

In the newest version of dplyr, this is useful in conjunction with group_by() and summarise().

library(dplyr)
geo_coordinates(linestrings) %>% 
  group_by(feature) %>% 
  summarise(geometry = geo_linestring(xy))
#> # A tibble: 2 x 2
#>   feature geometry                           
#>     <int> <wk_wksxp>                         
#> 1       1 <LINESTRING (1 0, 2 1, 5 2...>     
#> 2       2 <LINESTRING (10 0, 20 10, 50 20...>

Generics

There are several concepts that show up on repeat in geometry packages. The geovctrs package provides these as generics with reasonable implementations for the bundled geometry vector classes. Notably, geo_bbox()/geo_envelope() (return a geo_rect()), geo_srid(), and geo_z(). These generics work on anything that can be interpreted as a geometry vector, including character vectors (interpreted as well-known text), data frames with exactly one geometry column (interpreted as the geometry column), and anything that implements as_geovctr() (e.g., sf objects).

geo_bbox(geo_nc)
#> <geovctrs_rect[1]>
#> [1] (-84.32385 33.88199...-75.45698 36.58965)
geo_srid(head(geo_nc))
#> [1] 4267 4267 4267 4267 4267 4267

The geovctrs package also provides a framework for transformers, or functions that accept a vector of geometries and return a vector of geometries. These always return the same type as the input, as dictated by the implementations of as_geovctr() and restore_geovctr(). This enables transforming functions to work on a wide variety of input types, including sf objects:

library(sf)
#> Linking to GEOS 3.7.2, GDAL 2.4.2, PROJ 5.2.0
sf_nc <- read_sf(system.file("shape/nc.shp", package = "sf"))
geo_envelope(sf_nc)
#> Simple feature collection with 100 features and 14 fields
#> geometry type:  POLYGON
#> dimension:      XY
#> bbox:           xmin: -84.32385 ymin: 33.88199 xmax: -75.45698 ymax: 36.58965
#> CRS:            NA
#> # A tibble: 100 x 15
#>     AREA PERIMETER CNTY_ CNTY_ID NAME  FIPS  FIPSNO CRESS_ID BIR74 SID74 NWBIR74
#>    <dbl>     <dbl> <dbl>   <dbl> <chr> <chr>  <dbl>    <int> <dbl> <dbl>   <dbl>
#>  1 0.114      1.44  1825    1825 Ashe  37009  37009        5  1091     1      10
#>  2 0.061      1.23  1827    1827 Alle… 37005  37005        3   487     0      10
#>  3 0.143      1.63  1828    1828 Surry 37171  37171       86  3188     5     208
#>  4 0.07       2.97  1831    1831 Curr… 37053  37053       27   508     1     123
#>  5 0.153      2.21  1832    1832 Nort… 37131  37131       66  1421     9    1066
#>  6 0.097      1.67  1833    1833 Hert… 37091  37091       46  1452     7     954
#>  7 0.062      1.55  1834    1834 Camd… 37029  37029       15   286     0     115
#>  8 0.091      1.28  1835    1835 Gates 37073  37073       37   420     0     254
#>  9 0.118      1.42  1836    1836 Warr… 37185  37185       93   968     4     748
#> 10 0.124      1.43  1837    1837 Stok… 37169  37169       85  1612     1     160
#> # … with 90 more rows, and 4 more variables: BIR79 <dbl>, SID79 <dbl>,
#> #   NWBIR79 <dbl>, geometry <POLYGON>

See vignette("extending-geovctrs", package = "geovctrs") for instructions on how to create a class that works with the geovctrs framework.

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Common Classes and Data Structures for Geometry Vectors

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