pamitabh / batch-processing Public

Contains code for batch processing of images. Image datasets for me are couple of terabytes, generally microscopy images (obtained from LSFM).

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Name		Name	Last commit message	Last commit date
Latest commit History 149 Commits
PARALLEL_user_friendly_downsampling_mip_stitch_batchprocess_code		PARALLEL_user_friendly_downsampling_mip_stitch_batchprocess_code
archive		archive
for old images_pre2023		for old images_pre2023
user_friendly_downsampling_mip_stitch_batchprocess_code		user_friendly_downsampling_mip_stitch_batchprocess_code
.gitignore		.gitignore
LICENSE		LICENSE
README.md		README.md
batchprocess_stitch_3D_images.py		batchprocess_stitch_3D_images.py
batchprocess_stitch_using_notes.py		batchprocess_stitch_using_notes.py
copy_files_with_specific_name.py		copy_files_with_specific_name.py
copy_non_image_files.py		copy_non_image_files.py
downsample_multi_acquisition_oswalk.py		downsample_multi_acquisition_oswalk.py
downsample_single_acquisition_oswalk.py		downsample_single_acquisition_oswalk.py
generate_mip_bgsub_simple_oswalk.py		generate_mip_bgsub_simple_oswalk.py
misc_functions_rplab.py		misc_functions_rplab.py
single_timepoint_find_acq_time.py		single_timepoint_find_acq_time.py
sort_img_by_channels.py		sort_img_by_channels.py
timelapse_find_acq_delta_t.py		timelapse_find_acq_delta_t.py