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update vcflib for fixed vcfwave #423

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merged 2 commits into from
Oct 31, 2024
Merged

update vcflib for fixed vcfwave #423

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2da54fc
update vcflib for fixed vcfwave
AndreaGuarracino Oct 31, 2024
206ac19
add `-DWFA_GITMODULE=ON`
AndreaGuarracino Oct 31, 2024
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4 changes: 2 additions & 2 deletions Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -113,10 +113,10 @@ RUN git clone https://github.com/pangenome/vcfbub \

RUN git clone --recursive https://github.com/vcflib/vcflib.git \
&& cd vcflib \
&& git checkout 2ad261860807e66dbd9bcb07fee1af47b9930d70 \
&& git checkout 404b98a6a0601a8668fb039eae5196fa1ae12525 \
&& mkdir -p build \
&& cd build \
&& cmake -DZIG=OFF -DCMAKE_BUILD_TYPE=Debug .. && cmake --build . -- -j $(nproc) \
&& cmake -DZIG=OFF -DCMAKE_BUILD_TYPE=Debug -DWFA_GITMODULE=ON .. && cmake --build . -- -j $(nproc) \
&& mv vcfwave /usr/local/bin/vcfwave \
&& mv vcfuniq /usr/local/bin/vcfuniq \
&& cd ../ \
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