Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fix default log levels when compiling hictk in Debug mode #279

Merged
merged 1 commit into from
Oct 6, 2024
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
20 changes: 10 additions & 10 deletions src/hictk/include/hictk/tools/config.hpp
Original file line number Diff line number Diff line change
Expand Up @@ -36,7 +36,7 @@ struct BalanceICEConfig {
std::size_t threads{1};
std::size_t chunk_size{10'000'000};

std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
bool force{false};
};

Expand All @@ -58,7 +58,7 @@ struct BalanceSCALEConfig {
std::size_t threads{1};
std::size_t chunk_size{10'000'000};

std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
bool force{false};
};

Expand All @@ -72,7 +72,7 @@ struct BalanceVCConfig {
bool symlink_to_weight{true};
bool stdout_{false};

std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
bool force{false};
};

Expand All @@ -95,7 +95,7 @@ struct ConvertConfig {
std::size_t threads{2};
std::size_t chunk_size{10'000'000};

std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
bool force{false};
};

Expand Down Expand Up @@ -135,7 +135,7 @@ struct FixMcoolConfig {
std::size_t chunk_size{10'000'000};

std::size_t threads{1};
std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
bool force{false};
};

Expand Down Expand Up @@ -165,7 +165,7 @@ struct LoadConfig {
std::size_t threads{2};
std::uint32_t compression_lvl{9};

std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
std::size_t batch_size{10'000'000};
};

Expand All @@ -184,7 +184,7 @@ struct MergeConfig {
std::string count_type{"int"};

bool force{false};
std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
};

struct MetadataConfig {
Expand All @@ -202,7 +202,7 @@ struct RenameChromosomesConfig {
std::filesystem::path path_to_name_mappings{};
bool add_chr_prefix{false};
bool remove_chr_prefix{false};
std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
};

struct ValidateConfig {
Expand All @@ -212,7 +212,7 @@ struct ValidateConfig {
bool include_file_path{true};
bool exhaustive{true};
bool quiet{false};
std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
};

struct ZoomifyConfig {
Expand All @@ -232,7 +232,7 @@ struct ZoomifyConfig {
bool skip_all_vs_all_matrix{false};

bool force{false};
std::uint8_t verbosity{4};
std::uint8_t verbosity{3};
};

// clang-format off
Expand Down
Loading