GitHub - pmbrophy/mzDataTable: A set of functions for importing mzML/mzXML data into R as a data.table and converting to a number of on-disk formats

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A set of functions for importing mzML/mzXML data into R as a data.table and converting to a number of on-disk formats

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Name		Name	Last commit message	Last commit date
Latest commit History 80 Commits
R		R
inst/extdata		inst/extdata
man		man
src		src
tests		tests
vignettes		vignettes
.Rbuildignore		.Rbuildignore
.gitignore		.gitignore
DESCRIPTION		DESCRIPTION
NAMESPACE		NAMESPACE
README.txt		README.txt

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mzDataTable provides functions for importing mass spectrometry data formats (mzML/mzXML) into R as data.tables and disk.frames for in-memory and on-disk manipulation, respectively. This provides direct access to unprocessed data for exploration and experimentation using data.table syntax dplyr verbs supported by the data.table and disk.frame formats. Several domain specific functions have been developed for generating total ion chromatograms, extracting individual ions, and summing/gridding spectra to name a few. Additional tools are planned to be continually developed.