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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,55 @@ | ||
| name: release-pipeline | ||
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| on: | ||
| release: | ||
| types: | ||
| - created | ||
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| jobs: | ||
| release-job: | ||
| runs-on: ubuntu-latest | ||
| env: | ||
| PYPI_TOKEN: ${{ secrets.PYPI_TOKEN }} | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - name: Set up Python | ||
| uses: actions/setup-python@v1 | ||
| with: | ||
| python-version: 3.7 | ||
| # TODO: ideally, this pipeline should run parallelized tests in upstream jobs.. | ||
| #- name: Install test tooling | ||
| # run: | | ||
| # pip install pytest pytest-cov nose nose-parameterized | ||
| # pip install -r requirements.txt | ||
| #- name: Run tests | ||
| # run: | | ||
| # pytest --cov=./pymc3 --cov-report term-missing pymc3/ | ||
| - name: Install release tooling | ||
| run: | | ||
| pip install twine wheel | ||
| - name: Build package | ||
| run: | | ||
| python setup.py sdist bdist_wheel | ||
| - name: Check version number match | ||
| run: | | ||
| echo "GITHUB_REF: ${GITHUB_REF}" | ||
| # The GITHUB_REF should be something like "refs/tags/v3.x.x" | ||
| # Make sure the package version is the same as the tag | ||
| grep -Rq "^Version: ${GITHUB_REF:11}$" pymc3.egg-info/PKG-INFO | ||
| - name: Publish to PyPI | ||
| run: | | ||
| twine check dist/* | ||
| twine upload --repository pypi --username __token__ --password ${PYPI_TOKEN} dist/* | ||
| test-install-job: | ||
| needs: release-job | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Set up Python | ||
| uses: actions/setup-python@v1 | ||
| with: | ||
| python-version: 3.7 | ||
| - name: Give PyPI a chance to update the index | ||
| run: sleep 240 | ||
| - name: Install from PyPI | ||
| run: | | ||
| pip install pymc3==${GITHUB_REF:11} |
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| @@ -1,8 +1,25 @@ | ||
| ***** | ||
| Stats | ||
| ***** | ||
| Statistics and diagnostics are delegated to the | ||
| `ArviZ <https://arviz-devs.github.io/arviz/index.html>`_. | ||
| library, a general purpose library for | ||
| "exploratory analysis of Bayesian models." | ||
| For statistics and diagnostics, ``pymc3.<function>`` are now aliases | ||
| for ArviZ functions. Thus, the links below will redirect you to | ||
| ArviZ docs: | ||
|
|
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| .. currentmodule:: pymc3.stats | ||
|
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| .. automodule:: pymc3.stats | ||
| :members: | ||
|
|
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| - :func:`pymc3.bfmi <arviz:arviz.bfmi>` | ||
| - :func:`pymc3.compare <arviz:arviz.compare>` | ||
| - :func:`pymc3.ess <arviz:arviz.ess>` | ||
| - :data:`pymc3.geweke <arviz:arviz.geweke>` | ||
| - :func:`pymc3.hpd <arviz:arviz.hpd>` | ||
| - :func:`pymc3.loo <arviz:arviz.loo>` | ||
| - :func:`pymc3.mcse <arviz:arviz.mcse>` | ||
| - :func:`pymc3.r2_score <arviz:arviz.r2_score>` | ||
| - :func:`pymc3.rhat <arviz:arviz.rhat>` | ||
| - :func:`pymc3.summary <arviz:arviz.summary>` | ||
| - :func:`pymc3.waic <arviz:arviz.waic>` |
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