Update conda env files (#4757)

* Add dependencies to conda envs files

* Remove patsy dependency

* Pin scipy>1.4.1

* pre-commit change of requirements-dev.txt

conda-envs/environment-dev-py37.yml

@@ -3,6 +3,11 @@ channels:
 - conda-forge
 - defaults
 dependencies:
+- aesara>=2.0.9
+- arviz>=0.11.2
+- cachetools>=4.2.1
+- dill
+- fastprogress>=0.2.0
 - h5py>=2.7
 - ipython>=7.16
 - libblas=*=*mkl
@@ -16,7 +21,9 @@ dependencies:
 - pytest>=3.0
 - python-graphviz
 - python=3.7
-- scipy=1.2
+- recommonmark>=0.4
+- scipy>1.4.1
 - sphinx-autobuild>=0.7
 - sphinx>=1.5
+- typing-extensions
 - watermark

conda-envs/environment-dev-py38.yml

@@ -3,17 +3,28 @@ channels:
 - conda-forge
 - defaults
 dependencies:
+- aesara>=2.0.9
+- arviz>=0.11.2
+- cachetools>=4.2.1
+- dill
+- fastprogress>=0.2.0
 - h5py>=2.7
 - ipython>=7.16
 - libblas=*=*mkl
 - mkl-service
 - myst-nb
+- nbsphinx>=0.4
+- numpy>=1.15.0
 - numpydoc>=0.9
+- pandas
 - pre-commit>=2.8.0
 - pytest-cov>=2.5
 - pytest>=3.0
 - python-graphviz
 - python=3.8
+- recommonmark>=0.4
+- scipy>1.4.1
 - sphinx-autobuild>=0.7
 - sphinx>=1.5
+- typing-extensions>=3.7.4
 - watermark

conda-envs/environment-dev-py39.yml

@@ -3,17 +3,28 @@ channels:
 - conda-forge
 - defaults
 dependencies:
+- aesara>=2.0.9
+- arviz>=0.11.2
+- cachetools>=4.2.1
+- dill
+- fastprogress>=0.2.0
 - h5py>=2.7
 - ipython>=7.16
 - libblas=*=*mkl
 - mkl-service
 - myst-nb
+- nbsphinx>=0.4
+- numpy>=1.15.0
 - numpydoc>=0.9
+- pandas>=0.24.0
 - pre-commit>=2.8.0
 - pytest-cov>=2.5
 - pytest>=3.0
 - python-graphviz
 - python=3.9
+- recommonmark>=0.4
+- scipy>1.4.1
 - sphinx-autobuild>=0.7
 - sphinx>=1.5
+- typing-extensions>=3.7.4
 - watermark

requirements-dev.txt

@@ -1,13 +1,24 @@
 # This file is auto-generated by scripts/generate_pip_deps_from_conda.py, do not modify.
 # See that file for comments about the need/usage of each dependency.
 
+aesara>=2.0.9
+arviz>=0.11.2
+cachetools>=4.2.1
+dill
+fastprogress>=0.2.0
 h5py>=2.7
 ipython>=7.16
 myst-nb
+nbsphinx>=0.4
+numpy>=1.15.0
 numpydoc>=0.9
+pandas>=0.24.0
 pre-commit>=2.8.0
 pytest-cov>=2.5
 pytest>=3.0
+recommonmark>=0.4
+scipy>1.4.1
 sphinx-autobuild>=0.7
 sphinx>=1.5
+typing-extensions>=3.7.4
 watermark