Skip to content

Commit

Permalink
Made sample_shape same across all contexts in draw_values (#4305)
Browse files Browse the repository at this point in the history
* Made sample_shape same across all contexts, thereby resolves #3758

* Pass the failing test

* Worked on suggestions

* Used to_tuple for size

* Given a mention in release notes

* Update RELEASE-NOTES.md

Co-authored-by: Thomas Wiecki <thomas.wiecki@gmail.com>
  • Loading branch information
Sayam753 and twiecki authored Dec 11, 2020
1 parent 4fd56fd commit b953c40
Show file tree
Hide file tree
Showing 4 changed files with 14 additions and 3 deletions.
5 changes: 5 additions & 0 deletions RELEASE-NOTES.md
Original file line number Diff line number Diff line change
@@ -1,5 +1,10 @@
# Release Notes

## PyMC3 3.10.1 (on deck)

### Maintenance
- Make `sample_shape` same across all contexts in `draw_values` (see [#4305](https://github.com/pymc-devs/pymc3/pull/4305)).

## PyMC3 3.10.0 (7 December 2020)

This is a major release with many exciting new features. The biggest change is that we now rely on our own fork of [Theano-PyMC](https://github.com/pymc-devs/Theano-PyMC). This is in line with our [big announcement about our commitment to PyMC3 and Theano](https://pymc-devs.medium.com/the-future-of-pymc3-or-theano-is-dead-long-live-theano-d8005f8a0e9b).
Expand Down
1 change: 1 addition & 0 deletions pymc3/distributions/distribution.py
Original file line number Diff line number Diff line change
Expand Up @@ -690,6 +690,7 @@ def draw_values(params, point=None, size=None):
"""
# The following check intercepts and redirects calls to
# draw_values in the context of sample_posterior_predictive
size = to_tuple(size)
ppc_sampler = vectorized_ppc.get(None)
if ppc_sampler is not None:
# this is being done inside new, vectorized sample_posterior_predictive
Expand Down
7 changes: 4 additions & 3 deletions pymc3/distributions/simulator.py
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@

from scipy.spatial import cKDTree

from pymc3.distributions.distribution import NoDistribution, draw_values
from pymc3.distributions.distribution import NoDistribution, draw_values, to_tuple

__all__ = ["Simulator"]

Expand Down Expand Up @@ -114,11 +114,12 @@ def random(self, point=None, size=None):
-------
array
"""
size = to_tuple(size)
params = draw_values([*self.params], point=point, size=size)
if size is None:
if len(size) == 0:
return self.function(*params)
else:
return np.array([self.function(*params) for _ in range(size)])
return np.array([self.function(*params) for _ in range(size[0])])

def _str_repr(self, name=None, dist=None, formatting="plain"):
if dist is None:
Expand Down
4 changes: 4 additions & 0 deletions pymc3/tests/test_distributions_random.py
Original file line number Diff line number Diff line change
Expand Up @@ -1664,6 +1664,10 @@ def test_issue_3758(self):
for var in "abcd":
assert not np.isnan(np.std(samples[var]))

for var in "bcd":
std = np.std(samples[var] - samples["a"])
np.testing.assert_allclose(std, 1, rtol=1e-2)

def test_issue_3829(self):
with pm.Model() as model:
x = pm.MvNormal("x", mu=np.zeros(5), cov=np.eye(5), shape=(2, 5))
Expand Down

0 comments on commit b953c40

Please sign in to comment.