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Added theano.gof.graph.Constant into the type checks done in distributions.py #3599

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1 change: 1 addition & 0 deletions RELEASE-NOTES.md
Original file line number Diff line number Diff line change
Expand Up @@ -23,6 +23,7 @@
- Fixed a bug in `Categorical.logp`. In the case of multidimensional `p`'s, the indexing was done wrong leading to incorrectly shaped tensors that consumed `O(n**2)` memory instead of `O(n)`. This fixes issue [#3535](https://github.com/pymc-devs/pymc3/issues/3535)
- Fixed a defect in `OrderedLogistic.__init__` that unnecessarily increased the dimensionality of the underlying `p`. Related to issue issue [#3535](https://github.com/pymc-devs/pymc3/issues/3535) but was not the true cause of it.
- Wrapped `DensityDist.rand` with `generate_samples` to make it aware of the distribution's shape. Added control flow attributes to still be able to behave as in earlier versions, and to control how to interpret the `size` parameter in the `random` callable signature. Fixes [3553](https://github.com/pymc-devs/pymc3/issues/3553)
- Added `theano.gof.graph.Constant` to type checks done in `_draw_value` (fixes issue [3595](https://github.com/pymc-devs/pymc3/issues/3595))


## PyMC3 3.7 (May 29 2019)
Expand Down
10 changes: 5 additions & 5 deletions pymc3/distributions/distribution.py
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@
Model, get_named_nodes_and_relations, FreeRV,
ObservedRV, MultiObservedRV, Context, InitContextMeta
)
from ..vartypes import string_types
from ..vartypes import string_types, theano_constant
from .shape_utils import (
to_tuple,
get_broadcastable_dist_samples,
Expand Down Expand Up @@ -92,7 +92,7 @@ def getattr_value(self, val):
if isinstance(val, tt.TensorVariable):
return val.tag.test_value

if isinstance(val, tt.TensorConstant):
if isinstance(val, theano_constant):
return val.value

return val
Expand Down Expand Up @@ -502,7 +502,7 @@ def __init__(self):
def is_fast_drawable(var):
return isinstance(var, (numbers.Number,
np.ndarray,
tt.TensorConstant,
theano_constant,
tt.sharedvar.SharedVariable))


Expand Down Expand Up @@ -592,7 +592,7 @@ def draw_values(params, point=None, size=None):
if (next_, size) in drawn:
# If the node already has a givens value, skip it
continue
elif isinstance(next_, (tt.TensorConstant,
elif isinstance(next_, (theano_constant,
tt.sharedvar.SharedVariable)):
# If the node is a theano.tensor.TensorConstant or a
# theano.tensor.sharedvar.SharedVariable, its value will be
Expand Down Expand Up @@ -783,7 +783,7 @@ def _draw_value(param, point=None, givens=None, size=None):
"""
if isinstance(param, (numbers.Number, np.ndarray)):
return param
elif isinstance(param, tt.TensorConstant):
elif isinstance(param, theano_constant):
return param.value
elif isinstance(param, tt.sharedvar.SharedVariable):
return param.get_value()
Expand Down
16 changes: 16 additions & 0 deletions pymc3/tests/test_random.py
Original file line number Diff line number Diff line change
Expand Up @@ -91,6 +91,22 @@ def test_dep_vars(self):
np.all(val1 != val4), np.all(val2 != val3),
np.all(val2 != val4), np.all(val3 != val4)])

def test_gof_constant(self):
# Issue 3595 pointed out that slice(None) can introduce
# theano.gof.graph.Constant into the compute graph, which wasn't
# handled correctly by draw_values
n_d = 500
n_x = 2
n_y = 1
n_g = 10
g = np.random.randint(0, n_g, (n_d,)) # group
x = np.random.randint(0, n_x, (n_d,)) # x factor
with pm.Model():
multi_dim_rv = pm.Normal('multi_dim_rv', mu=0, sd=1, shape=(n_x, n_g, n_y))
indexed_rv = multi_dim_rv[x, g, :]
i = draw_values([indexed_rv])
assert i is not None


class TestJointDistributionDrawValues(SeededTest):
def test_joint_distribution(self):
Expand Down
45 changes: 27 additions & 18 deletions pymc3/vartypes.py
Original file line number Diff line number Diff line change
@@ -1,20 +1,26 @@
__all__ = ['bool_types', 'int_types', 'float_types', 'complex_types', 'continuous_types',
'discrete_types', 'typefilter', 'isgenerator']

bool_types = set(['int8'])

int_types = set(['int8',
'int16',
'int32',
'int64',
'uint8',
'uint16',
'uint32',
'uint64'])
float_types = set(['float32',
'float64'])
complex_types = set(['complex64',
'complex128'])
from theano.tensor import Constant as tensor_constant
from theano.gof.graph import Constant as graph_constant


__all__ = [
"bool_types",
"int_types",
"float_types",
"complex_types",
"continuous_types",
"discrete_types",
"typefilter",
"isgenerator",
"theano_constant",
]

bool_types = set(["int8"])

int_types = set(
["int8", "int16", "int32", "int64", "uint8", "uint16", "uint32", "uint64"]
)
float_types = set(["float32", "float64"])
complex_types = set(["complex64", "complex128"])
continuous_types = float_types | complex_types
discrete_types = bool_types | int_types

Expand All @@ -27,4 +33,7 @@ def typefilter(vars, types):


def isgenerator(obj):
return hasattr(obj, '__next__')
return hasattr(obj, "__next__")


theano_constant = (tensor_constant, graph_constant)