Skip to content

Tags: pysam-developers/pysam

Tags

v0.23.0

Verified

This tag was signed with the committer’s verified signature.
jmarshall John Marshall
pysam release v0.23.0 wrapping htslib/samtools/bcftools 1.21

This release adds Python 3.13 support and wheels, reinstates
HTTPS/S3/GCS support in the pre-built wheels on Debian and
Ubuntu, improves documentation, and has various other bug fixes
and improvements as listed in NEWS in the associated commit.

v0.22.1

Verified

This tag was signed with the committer’s verified signature.
jmarshall John Marshall
pysam bugfix release v0.22.1 wrapping htslib/samtools/bcftools 1.18

v0.22.0

Verified

This tag was signed with the committer’s verified signature.
jmarshall John Marshall
pysam release v0.22.0 wrapping htslib/samtools/bcftools 1.18

This release removes Cython from the runtime dependencies (an issue
introduced in v0.21.0 that affected interactions with other packages),
removes the long-standing spurious "Could not retrieve index file"
message when opening an AlignmentFile, and has various other bug fixes
and improvements as listed in NEWS in the associated commit.

v0.21.0.1

pysam v0.21.0 as published to PyPI

The eventual PyPI release of v0.21.0 was produced from this commit,
via a tag named 'publish-v0.21.0.1'. Differences from the v0.21.0 tag
were mainly cibuildwheel script trivia, but also included a libcbcf.pyx
change removing an incorrect annotation (17bb13d).

v0.21.0

Verified

This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
Merge pull request #1178 from pysam-developers/update-release-notes

updated release notes

v0.20.0

Release notes updates

v0.19.1

Verified

This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
Merge pull request #1109 from pysam-developers/v0.19.1.x

V0.19.1.x

v0.19.0

Verified

This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
Merge pull request #1091 from pysam-developers/v0.19.0.x

V0.19.0.x

v0.18.0

Verified

This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
Merge pull request #1045 from erikbgithub/master

baseimage for containers

v0.17.0

restrict publish actions