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Merge pull request #143 from lvsltz/master #134

Merge pull request #143 from lvsltz/master

Merge pull request #143 from lvsltz/master #134

Workflow file for this run

name: Build
on:
workflow_dispatch:
inputs:
debug_enabled:
type: boolean
description: 'Enable tmate debugging'
required: false
default: false
use_cached_itksnap_build:
type: boolean
description: 'Use cached ITK-SNAP build'
required: false
default: false
skip_testing:
type: boolean
description: 'Skip testing'
required: false
default: false
upload_release:
type: boolean
description: 'Upload a named release to SourceForge'
required: false
default: false
push:
# release:
# types:
# - published
jobs:
build_wheels:
name: Build wheels on ${{ matrix.os }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-20.04,macos-13,macos-14,windows-2022]
itk_ver: [ '5.4.0' ]
vtk_ver: [ '9.3.1' ]
qt_ver: [ '6.6.3' ]
include:
- os: ubuntu-20.04
qt_host: linux
qt_arch: gcc_64
ctest_cmd: xvfb-run -a ctest
- os: macos-13
qt_host: mac
qt_arch: clang_64
ctest_cmd: ctest
- os: macos-14
qt_host: mac
qt_arch: clang_64
ctest_cmd: ctest
- os: windows-2022
qt_host: windows
qt_arch: win64_msvc2019_64
ctest_cmd: ctest
steps:
# Select MSVC tools on windows
- name: Select MSVC 2019/2022
uses: ilammy/msvc-dev-cmd@v1
if: ${{ runner.os == 'Windows' }}
# Setup ninja
- name: Setup Ninja
uses: seanmiddleditch/gha-setup-ninja@master
# Install system packages
- name: Install System Packages
uses: ConorMacBride/install-package@v1
with:
# brew:
apt: libcurl4-openssl-dev
choco: nsis
# Install curl on Windows
- name: Install libcurl on Windows
uses: johnwason/vcpkg-action@v6
id: vcpkg
if: ${{ runner.os == 'Windows' }}
with:
pkgs: curl
triplet: x64-windows-release
token: ${{ github.token }}
github-binarycache: false
# Install Qt
- name: Install Qt on Ubuntu
uses: jurplel/install-qt-action@v4
with:
version: ${{ matrix.qt_ver }}
target: 'desktop'
host: ${{ matrix.qt_host }}
arch: ${{ matrix.qt_arch }}
cache: true
# Use cached VTK build if available
- name: Restore VTK Cache
id: cache-vtk
uses: actions/cache/restore@v4
with:
path: ${{github.workspace}}/vtk/install
key: ${{ matrix.os }}-vtk-${{ matrix.vtk_ver }}
# Check out VTK
- name: Checkout VTK
if: steps.cache-vtk.outputs.cache-hit != 'true'
uses: actions/checkout@v4
with:
repository: 'Kitware/VTK.git'
ref: v${{ matrix.vtk_ver }}
submodules: true
path: 'vtk'
# Build VTK
- name: Build VTK
if: steps.cache-vtk.outputs.cache-hit != 'true'
uses: threeal/cmake-action@v2.0.0
with:
source-dir: ${{github.workspace}}/vtk
build-dir: ${{github.workspace}}/vtk/build
build-args: "-t install -- -k 0"
generator: Ninja
options: |
BUILD_TESTING:BOOL=FALSE
BUILD_EXAMPLES:BOOL=FALSE
BUILD_SHARED_LIBS:BOOL=FALSE
VTK_REQUIRED_OBJCXX_FLAGS:STRING=
VTK_GROUP_ENABLE_Qt:STRING=YES
VTK_MODULE_ENABLE_VTK_GUISupportQtQuick:STRING=NO
VTK_MODULE_ENABLE_VTK_GUISupportQtSQL:STRING=NO
CMAKE_BUILD_TYPE=Release
CMAKE_INSTALL_PREFIX=${{github.workspace}}/vtk/install
${{ runner.os == 'Windows' && 'VTK_SMP_ENABLE_STDTHREAD=OFF' || '' }}
# Cache the VTK build
- name: Cache VTK
if: steps.cache-vtk.outputs.cache-hit != 'true'
uses: actions/cache/save@v4
with:
path: ${{github.workspace}}/vtk/install
key: ${{ matrix.os }}-vtk-${{ matrix.vtk_ver }}
# Use cached ITK build if available. Unfortunately ITK make install fails to
# install one file, vnl_vector_ref.hxx so instead of caching the install dir
# we are caching the build dir
- name: Restore ITK Cache
id: cache-itk
uses: actions/cache/restore@v4
with:
path: ${{github.workspace}}/itk
key: ${{ matrix.os }}-itk-${{ matrix.itk_ver }}-build
# Check out ITK
- name: Checkout ITK
if: steps.cache-itk.outputs.cache-hit != 'true'
uses: actions/checkout@v4
with:
repository: 'InsightSoftwareConsortium/ITK.git'
ref: v${{ matrix.itk_ver }}
submodules: true
path: 'itk'
# Build ITK
- name: Build ITK
if: steps.cache-itk.outputs.cache-hit != 'true'
uses: threeal/cmake-action@v2.0.0
with:
source-dir: ${{github.workspace}}/itk
build-dir: ${{github.workspace}}/itk/build
build-args: |
-t
install
generator: Ninja
options: |
BUILD_TESTING:BOOL=FALSE
BUILD_EXAMPLES:BOOL=FALSE
Module_MorphologicalContourInterpolation:BOOL=TRUE
CMAKE_BUILD_TYPE=Release
CMAKE_INSTALL_PREFIX=${{github.workspace}}/itk/install
- name: Cache ITK
if: steps.cache-itk.outputs.cache-hit != 'true'
uses: actions/cache/save@v4
with:
path: ${{github.workspace}}/itk
key: ${{ matrix.os }}-itk-${{ matrix.itk_ver }}-build
# Restore ITK-SNAP cache if requested by the user. This should allow us to create faster builds
# because only the updated files should require rebuilding
- name: Restore ITK-SNAP Cache (optional)
id: cache-restore-itksnap
uses: actions/cache/restore@v4
if: ${{ github.event_name == 'workflow_dispatch' && inputs.use_cached_itksnap_build }}
with:
path: ${{github.workspace}}/itksnap
key: ${{ matrix.os }}-itksnap-build-${{ github.ref }}
# Checkout ITK-SNAP code
- name: Checkout code
uses: actions/checkout@v4
with:
submodules: true
clean: false
path: itksnap
persist-credentials: false
# Post-checkout fetch. This is to prevent errors from the ExperimentalUpdate command due to
# some bizarre git error with greedy submodule.
- name: Post-checkout fetch
working-directory: ${{github.workspace}}/itksnap
shell: bash
continue-on-error: true
run: git fetch
# Configure ITK-SNAP
- name: Configure ITK-SNAP
uses: threeal/cmake-action@v2.0.0
continue-on-error: false
with:
source-dir: ${{github.workspace}}/itksnap
build-dir: ${{github.workspace}}/itksnap/build
generator: Ninja
run-build: false
args: ${{ runner.os == 'Windows' && steps.vcpkg.outputs.vcpkg-cmake-config || '' }}
options: |
ITK_DIR=${{github.workspace}}/itk/build
VTK_DIR=${{github.workspace}}/vtk/install/lib/cmake/vtk-9.3
CMAKE_BUILD_TYPE=Release
DO_UPLOAD=ON
SITE=github-runner-${{ matrix.os }}
${{ runner.os == 'Windows' && format('CURL_LIBRARY={0}/vcpkg/installed/x64-windows-release/lib/libcurl.lib', github.workspace) || '' }}
${{ runner.os == 'Windows' && format('CURL_INCLUDE_DIR={0}/vcpkg/installed/x64-windows-release/include', github.workspace) || '' }}
${{ runner.os == 'MacOS' && 'CMAKE_OSX_DEPLOYMENT_TARGET=12.6' || '' }}
- name: Setup tmate session
uses: mxschmitt/action-tmate@v3
if: ${{ github.event_name == 'workflow_dispatch' && inputs.debug_enabled }}
# Build ITK-SNAP using CDash
- name: ITK-SNAP Dashboard -- Configure and Build
id: ctest-config
working-directory: ${{github.workspace}}/itksnap/build
shell: bash
continue-on-error: true
run: |
${{ matrix.ctest_cmd }} -D ExperimentalStart
${{ matrix.ctest_cmd }} -D ExperimentalUpdate
${{ matrix.ctest_cmd }} -D ExperimentalConfigure
${{ matrix.ctest_cmd }} -D ExperimentalBuild
- name: ITK-SNAP Dashboard -- Test
id: ctest-test
if: ${{ github.event_name != 'workflow_dispatch' || !inputs.skip_testing }}
working-directory: ${{github.workspace}}/itksnap/build
shell: bash
continue-on-error: true
run: |
${{ matrix.ctest_cmd }} -D ExperimentalTest
- name: ITK-SNAP Dashboard -- Submit
id: ctest-submit
working-directory: ${{github.workspace}}/itksnap/build
shell: bash
continue-on-error: true
run: |
${{ matrix.ctest_cmd }} -D ExperimentalSubmit
- name: ITK-SNAP Dashboard -- Gatekeeper
if: ${{ steps.ctest-config.outcome != 'success' || steps.ctest-submit.outcome != 'success' }}
run: exit -1
# Cache the ITK-SNAP build
- name: Cache ITK-SNAP build directory
if: steps.cache-restore-itksnap.outputs.cache-hit != 'true'
uses: actions/cache/save@v4
with:
path: ${{github.workspace}}/itksnap
key: ${{ matrix.os }}-itksnap-build-${{ github.ref }}
# Add libcurl.dll to PATH on windows
- name: Append directory with libcurl.dll to PATH
if: ${{ runner.os == 'Windows' }}
shell: bash
run: |
echo "${{github.workspace}}/vcpkg/installed/x64-windows-release/bin" >> $GITHUB_PATH
# On MacOS, setup keychain for application signing
# The notarization keys are from https://appstoreconnect.apple.com/access/integrations/api
- name: Setup codesign keychain
if: ${{ runner.os == 'MacOS' }}
working-directory: ${{github.workspace}}/itksnap/build
env:
# Private key from the .p12 file (export certificate & key to .p12)
CODESIGN_P12_KEY: ${{ secrets.SNAP_MACOSX_CODESIGN_P12_KEY }}
# Unique substring of the certificate name (the number part is ok)
CODESIGN_CERT: "${{ secrets.SNAP_MACOS_DEV_CERTIFICATE_NAME }}"
# Notarization pkey/keyid/issuer triplet (pkey is base64 encoded)
NOTARIZE_KEY: ${{ secrets.SNAP_MACOS_NOTARIZE_PRIVATE_KEY }}
NOTARIZE_KEY_ID: ${{ secrets.SNAP_MACOS_NOTARIZE_KEY_ID }}
NOTARIZE_ISSUER: ${{ secrets.SNAP_MACOS_NOTARIZE_ISSUER_UUID }}
run: |
security create-keychain -p "" build.keychain
security default-keychain -s build.keychain
security unlock-keychain -p "" build.keychain
security import ../Utilities/MacOS/apple_developer_for_github.p12 -k build.keychain -P "$CODESIGN_P12_KEY" -T /usr/bin/codesign
security set-key-partition-list -S apple-tool:,apple: -s -k "" build.keychain
echo $NOTARIZE_KEY | base64 -d > notarize_key
xcrun notarytool store-credentials -k notarize_key -d $NOTARIZE_KEY_ID -i $NOTARIZE_ISSUER --keychain /Users/runner/Library/Keychains/build.keychain-db itksnap_notarize
rm -rf notarize_key
cmake -DSNAP_MACOS_NOTARYTOOL_PROFILE=itksnap_notarize -DSNAP_MACOS_KEYCHAIN=/Users/runner/Library/Keychains/build.keychain-db -DSNAP_MACOSX_CODESIGN_CERT=$CODESIGN_CERT .
# Package ITK-SNAP
- name: Package ITK-SNAP
continue-on-error: false
working-directory: ${{github.workspace}}/itksnap/build
shell: bash
run: |
cpack --verbose
# Extract the filename of ITK-SNAP package
- name: Read package name
id: package_itksnap
working-directory: ${{github.workspace}}/itksnap/build
shell: bash
run: |
echo "package_file=$(jq -r '.filename' package_info.json)" >> $GITHUB_OUTPUT
- name: Upload artifact
uses: actions/upload-artifact@v4
with:
name: ${{steps.package_itksnap.outputs.package_file}}
path: ${{github.workspace}}/itksnap/build/${{steps.package_itksnap.outputs.package_file}}
- name: Upload to sourceforge
working-directory: ${{github.workspace}}/itksnap/build
shell: bash
env:
PRIVATE_KEY: ${{ secrets.SNAP_SOURCEFORGE_PRIVATE_KEY }}
PUBLIC_KEY: ${{ secrets.SNAP_SOURCEFORGE_PUBLIC_KEY }}
USER: ${{ secrets.SNAP_SOURCEFORGE_PUBLIC_USERNAME }}
run: |
mkdir -p $HOME/.ssh && chmod 700 $HOME/.ssh
echo $PUBLIC_KEY | base64 -d > $HOME/.ssh/sfkey.pub && chmod 600 $HOME/.ssh/sfkey.pub
echo $PRIVATE_KEY | base64 -d > $HOME/.ssh/sfkey && chmod 600 $HOME/.ssh/sfkey
touch $HOME/.ssh/config && chmod 600 $HOME/.ssh/config
echo "StrictHostKeyChecking=no" >> $HOME/.ssh/config
echo "BatchMode=yes" >> $HOME/.ssh/config
echo "IdentityFile=~/.ssh/sfkey" >> $HOME/.ssh/config
cmake -DSCP_ARGUMENTS=-v -DSCP_USERNAME=$USER .
cmake --build . --target itksnap_upload_experimental
- name: Upload named release to sourceforge
if: ${{ github.event_name == 'workflow_dispatch' && inputs.upload_release }}
working-directory: ${{github.workspace}}/itksnap/build
shell: bash
run: |
cmake --build . --target itksnap_upload_release
- name: Cleanup secrets
if: ${{ always() }}
shell: bash
working-directory: ${{github.workspace}}/itksnap/build
run: |
rm -rf $HOME/.ssh/sfkey.pub $HOME/.ssh/sfkey
${{ runner.os == 'MacOS' && 'security delete-keychain build.keychain' || 'echo na' }}