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I helped a collaborator run cluster-features after importing sequences and a biom table that were processed with a non-QIIME 2 pipeline, and we had the surprising result that the resulting FeatureData[Sequence] had more records in it than there were features in the FeatureTable. It turned out that the input FeatureData[Sequence] had sequences for features that had been filtered out of the input FeatureTable. We should probably raise an error if the set of feature ids isn't the same between the two inputs.
This is a bit of an edge case, so isn't really high priority (this will probably primarily be applied to FeatureTable and FeatureData[Sequence] artifacts that are generated through a QIIME 2 pipeline).
The text was updated successfully, but these errors were encountered:
I helped a collaborator run
cluster-features
after importing sequences and a biom table that were processed with a non-QIIME 2 pipeline, and we had the surprising result that the resultingFeatureData[Sequence]
had more records in it than there were features in theFeatureTable
. It turned out that the inputFeatureData[Sequence]
had sequences for features that had been filtered out of the inputFeatureTable
. We should probably raise an error if the set of feature ids isn't the same between the two inputs.This is a bit of an edge case, so isn't really high priority (this will probably primarily be applied to
FeatureTable
andFeatureData[Sequence]
artifacts that are generated through a QIIME 2 pipeline).The text was updated successfully, but these errors were encountered: