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fix failing tests due to pandas 1.4.0 #3174

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Merged
merged 3 commits into from
Jan 27, 2022
Merged

fix failing tests due to pandas 1.4.0 #3174

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1cf0658
fix failing tests
antgonza Jan 26, 2022
7298805
debug prints
antgonza Jan 26, 2022
080f0c1
fix tests
antgonza Jan 27, 2022
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7 changes: 3 additions & 4 deletions qiita_pet/handlers/api_proxy/tests/test_prep_template.py
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Original file line number Diff line number Diff line change
Expand Up @@ -235,7 +235,7 @@ def test_prep_template_summary_get_req(self):
('TCGACCAAACAC', 1), ('TGAGTGGTCTGT', 1),
('TGCTACAGACGT', 1), ('TGGTTATGGCAC', 1),
('TTGCACCGTCGA', 1)]), ('center_name', [('ANL', 27)]),
('center_project_name', [('nan', 27)]),
('center_project_name', [('None', 27)]),
('emp_status', [('EMP', 27)]),
('experiment_center', [('ANL', 27)]),
('experiment_design_description', [('micro biome of soil and '
Expand Down Expand Up @@ -269,7 +269,7 @@ def test_prep_template_summary_get_req(self):
('target_gene', [('16S rRNA', 27)]),
('target_subfragment', [('V4', 27)])], 'status': 'success',
'message': '', 'editable': True}
self.assertEqual(obs, exp)
self.assertDictEqual(obs, exp)

def test_prep_template_summary_get_req_no_access(self):
obs = prep_template_summary_get_req(1, 'demo@microbio.me')
Expand Down Expand Up @@ -451,7 +451,7 @@ def test_prep_template_post_req(self):
exp = {'status': 'warning',
'message': [
'Both a converter and dtype were specified for column '
'sample_name - only the converter will be used', 'Some '
'sample_name - only the converter will be used.', 'Some '
'functionality will be disabled due to missing columns:',
'\tEBI submission disabled: center_name, '
'experiment_design_description, instrument_model, '
Expand All @@ -462,7 +462,6 @@ def test_prep_template_post_req(self):
'description of these fields.'],
'file': 'update.txt',
'id': 'ignored in test'}

self.assertCountEqual(obs['message'].split('\n'), exp['message'])
self.assertEqual(obs['status'], exp['status'])
self.assertEqual(obs['file'], exp['file'])
Expand Down