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Gradients Framework #1293
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Gradients Framework #1293
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Clean PR with the current gradient state
Remove old files and notes
Enforce number of character <= 100
…nother look. Same goes for some of the class method names inside of LinCombQFI and OverlapQFI
…base_classes additional base classes
* Update derivatives_base.py Added some doc-strings to several methods inside of derivatives_base.py. Also simplified the logic of `erase_operator_coeffs` by removing some leftover logic from previous implementations. * Update qiskit/aqua/operators/gradients/derivatives_base.py Co-authored-by: Julien Gacon <jul@zurich.ibm.com>
This notebook will be removed after today - sorry but this is the best way to share this notebook with @bryce
Co-authored-by: Julien Gacon <gaconju@gmail.com>
Co-authored-by: Julien Gacon <gaconju@gmail.com>
Cryoris
reviewed
Oct 15, 2020
Cryoris
reviewed
Oct 15, 2020
Co-authored-by: Julien Gacon <gaconju@gmail.com>
Cryoris
reviewed
Oct 15, 2020
Co-authored-by: Julien Gacon <gaconju@gmail.com>
Co-authored-by: Julien Gacon <gaconju@gmail.com>
Cryoris
approved these changes
Oct 15, 2020
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LGTM, items for backlog:
- in-code comments to make it easier for developers to understand what's going on
- try removing some deepcopies in favor of perfomance
- docstrings should contain examples and be checked for duplications (a general second iteration would be good)
- check if some staticmethods should be decoupled from the classes and put into functions so they are better reusable (what some might call a
utilsfile)
woodsp-ibm
approved these changes
Oct 15, 2020
mtreinish
pushed a commit
to mtreinish/qiskit-core
that referenced
this pull request
Nov 20, 2020
* clean PR with the current gradient state * Update derivatives_base.py * Update hessian.py * Update test_grad.py * add notebooks * Typing, Linting * Update gradient_framework.ipynb * typing qfi * enable gradients for VQAlgorithms * remove old files and notes * enfoce num chars <= 100 * fix an import * re-adjust import * fix other imports * additional base classes * test cases pass and the core logic all works. Doc strings could use another look. Same goes for some of the class method names inside of LinCombQFI and OverlapQFI * Update derivatives_base.py (qiskit-community/qiskit-aqua#75) * Update derivatives_base.py Added some doc-strings to several methods inside of derivatives_base.py. Also simplified the logic of `erase_operator_coeffs` by removing some leftover logic from previous implementations. * Update qiskit/aqua/operators/gradients/derivatives_base.py Co-authored-by: Julien Gacon <jul@zurich.ibm.com> * update ordering/naming * reshuffle, rename * add VQE gradient unittest * add notebook B2Meeting This notebook will be removed after today - sorry but this is the best way to share this notebook with @bryce * Update gradient_framework_reduced.ipynb * removed a leftover notebook file * removed the notebooks (and am pushing them to a cleaned up QGradients repo) * Update gradient.py This small change prevents trivial/zero operators from appearing in SummedOps during product rule computations. * will be deleted need this to pull sry * fix qfi docstring * Add retworkx version check * delete notebooks, fixed seed fin_diff circSampler, fix kwargs import error * Delete test_natural_gradient.py * fix symbol map in parameter expression grad * typing * Update qfi.py * typing * Update test_grad.py * added a docstring to unroll_operator * Update hessian.py * Update gradient.py * Fix statevector check (not always a QuantumInstance) * Update hessian.py * fix lint of qiskit/aqua/operators/gradients/*.py * fix lint of qiskit/aqua/operators/gradients/circuit_gradients/*.py * fix lint of qiskit/aqua/operators/gradients/circuit_qfis/*.py * fix test_grad * Copy folder * remove unknown aqua changes * fix ListOp, VQAlgorithms for gradients * VQE Gradients import * update operators init * rm some changes not related to gradients * mypy fixes * skip jax test if not installed * try to fix cyclic import * fix lint in isinstance * uncomment vqe tests + consistent HAS_JAX * mypy fixes * ignore mypy warning from opbase.coeff * fix isinstance used w/ typehints * try fixing sphinx * ignore cases mypy doesn't understand correctly * fix unnecessary else after raise * Add jax to github actions * fix spell * add jax dependency to actions lint * fix spell * Reduce VQE Iterations in unittest * Use ImportError * fix lint * Add gradient framework release note * update gradient framework release note * fix reno formatting errors * Update to documentation * Fix doctring to avoid warnings * update gradient init * update qaoa docstring * remover retworkx check * update docstrings * lint fixes * update docstrings to hint max_evals_grouped deprecation if gradient is given * Update test_grad.py Several high-level function calls still used a `method=...` argument in the initialization; however, we changed this to `grad_method`, `hess_method`, `qfi_method`. So I updated these arguments. This was causing some tests to not be carried out as the default argument was inferred when the correct argument name was not assigned a method type. * Update test_grad.py Added a test case for Hessian.py that forces it to differentiate an operator with a custom combo_fn * Update lin_comb circuit gradients to fix hessian evaluation * Move renamed gradient test into operator file * update lin_comb * update lin_comb gradients * fix lint * fix lin_comb * fixed the bugs that were causing Hessian logic to fail with custom combo_fns * increase coverage of natural gradient * merge zoufalc gradients * try all combinations of grad_method and qfi_method * style fix * updates for hessians * remove redundant line * make fixes * remove hessian from grad * relax VQE test * remove redundant lambda * fix identation * fix spelling * fix whitespace * revert qfi_method in test_natural_gradient * revert param name * fix lint * remove redundant comment * update identation * fix np.random.seed * increase coverage for lin_comb * fix lint * lint * whitespace fix * docstring * lint * disable misspelling * add yy, zz to pylintdict * Update __init__.py updated the gradients __init__ file with some of the content from the release note * fixed linting * update init file * fix spell * fix spelling * remove redundant import * attempt to fix sphinx qiskit-community/qiskit-aqua#1 * Update qiskit/aqua/operators/gradients/qfi.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * try to fix sphinx no.2 * add words to pylintdict * fix cryoris comments * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * cryoris comments * delete unneccessary * Update qiskit/aqua/operators/gradients/hessian.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * raise warning hessians * include docstring TypeError * Update qiskit/aqua/operators/gradients/circuit_qfis/overlap_diag.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/gradient.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * remove unnecessary os comment * Update qiskit/aqua/operators/gradients/circuit_gradients/lin_comb.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Insert proper Error * apply changes from code review Co-authored-by: Cryoris <jules.gacon@googlemail.com> Co-authored-by: Takashi Imamichi <imamichi@jp.ibm.com> Co-authored-by: Bryce-Fuller <Bryce.Fuller@ibm.com> Co-authored-by: Julien Gacon <jul@zurich.ibm.com> Co-authored-by: Manoel Marques <manoel.marques@ibm.com> Co-authored-by: Manoel Marques <manoel@us.ibm.com> Co-authored-by: woodsp <woodsp@us.ibm.com> Co-authored-by: Steve Wood <40241007+woodsp-ibm@users.noreply.github.com> Co-authored-by: Julien Gacon <gaconju@gmail.com>
manoelmarques
added a commit
to manoelmarques/qiskit-terra
that referenced
this pull request
Dec 2, 2020
* clean PR with the current gradient state * Update derivatives_base.py * Update hessian.py * Update test_grad.py * add notebooks * Typing, Linting * Update gradient_framework.ipynb * typing qfi * enable gradients for VQAlgorithms * remove old files and notes * enfoce num chars <= 100 * fix an import * re-adjust import * fix other imports * additional base classes * test cases pass and the core logic all works. Doc strings could use another look. Same goes for some of the class method names inside of LinCombQFI and OverlapQFI * Update derivatives_base.py (qiskit-community/qiskit-aqua#75) * Update derivatives_base.py Added some doc-strings to several methods inside of derivatives_base.py. Also simplified the logic of `erase_operator_coeffs` by removing some leftover logic from previous implementations. * Update qiskit/aqua/operators/gradients/derivatives_base.py Co-authored-by: Julien Gacon <jul@zurich.ibm.com> * update ordering/naming * reshuffle, rename * add VQE gradient unittest * add notebook B2Meeting This notebook will be removed after today - sorry but this is the best way to share this notebook with @bryce * Update gradient_framework_reduced.ipynb * removed a leftover notebook file * removed the notebooks (and am pushing them to a cleaned up QGradients repo) * Update gradient.py This small change prevents trivial/zero operators from appearing in SummedOps during product rule computations. * will be deleted need this to pull sry * fix qfi docstring * Add retworkx version check * delete notebooks, fixed seed fin_diff circSampler, fix kwargs import error * Delete test_natural_gradient.py * fix symbol map in parameter expression grad * typing * Update qfi.py * typing * Update test_grad.py * added a docstring to unroll_operator * Update hessian.py * Update gradient.py * Fix statevector check (not always a QuantumInstance) * Update hessian.py * fix lint of qiskit/aqua/operators/gradients/*.py * fix lint of qiskit/aqua/operators/gradients/circuit_gradients/*.py * fix lint of qiskit/aqua/operators/gradients/circuit_qfis/*.py * fix test_grad * Copy folder * remove unknown aqua changes * fix ListOp, VQAlgorithms for gradients * VQE Gradients import * update operators init * rm some changes not related to gradients * mypy fixes * skip jax test if not installed * try to fix cyclic import * fix lint in isinstance * uncomment vqe tests + consistent HAS_JAX * mypy fixes * ignore mypy warning from opbase.coeff * fix isinstance used w/ typehints * try fixing sphinx * ignore cases mypy doesn't understand correctly * fix unnecessary else after raise * Add jax to github actions * fix spell * add jax dependency to actions lint * fix spell * Reduce VQE Iterations in unittest * Use ImportError * fix lint * Add gradient framework release note * update gradient framework release note * fix reno formatting errors * Update to documentation * Fix doctring to avoid warnings * update gradient init * update qaoa docstring * remover retworkx check * update docstrings * lint fixes * update docstrings to hint max_evals_grouped deprecation if gradient is given * Update test_grad.py Several high-level function calls still used a `method=...` argument in the initialization; however, we changed this to `grad_method`, `hess_method`, `qfi_method`. So I updated these arguments. This was causing some tests to not be carried out as the default argument was inferred when the correct argument name was not assigned a method type. * Update test_grad.py Added a test case for Hessian.py that forces it to differentiate an operator with a custom combo_fn * Update lin_comb circuit gradients to fix hessian evaluation * Move renamed gradient test into operator file * update lin_comb * update lin_comb gradients * fix lint * fix lin_comb * fixed the bugs that were causing Hessian logic to fail with custom combo_fns * increase coverage of natural gradient * merge zoufalc gradients * try all combinations of grad_method and qfi_method * style fix * updates for hessians * remove redundant line * make fixes * remove hessian from grad * relax VQE test * remove redundant lambda * fix identation * fix spelling * fix whitespace * revert qfi_method in test_natural_gradient * revert param name * fix lint * remove redundant comment * update identation * fix np.random.seed * increase coverage for lin_comb * fix lint * lint * whitespace fix * docstring * lint * disable misspelling * add yy, zz to pylintdict * Update __init__.py updated the gradients __init__ file with some of the content from the release note * fixed linting * update init file * fix spell * fix spelling * remove redundant import * attempt to fix sphinx qiskit-community/qiskit-aqua#1 * Update qiskit/aqua/operators/gradients/qfi.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * try to fix sphinx no.2 * add words to pylintdict * fix cryoris comments * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * cryoris comments * delete unneccessary * Update qiskit/aqua/operators/gradients/hessian.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * raise warning hessians * include docstring TypeError * Update qiskit/aqua/operators/gradients/circuit_qfis/overlap_diag.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/gradient.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * remove unnecessary os comment * Update qiskit/aqua/operators/gradients/circuit_gradients/lin_comb.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Insert proper Error * apply changes from code review Co-authored-by: Cryoris <jules.gacon@googlemail.com> Co-authored-by: Takashi Imamichi <imamichi@jp.ibm.com> Co-authored-by: Bryce-Fuller <Bryce.Fuller@ibm.com> Co-authored-by: Julien Gacon <jul@zurich.ibm.com> Co-authored-by: Manoel Marques <manoel.marques@ibm.com> Co-authored-by: Manoel Marques <manoel@us.ibm.com> Co-authored-by: woodsp <woodsp@us.ibm.com> Co-authored-by: Steve Wood <40241007+woodsp-ibm@users.noreply.github.com> Co-authored-by: Julien Gacon <gaconju@gmail.com>
manoelmarques
added a commit
to manoelmarques/qiskit-terra
that referenced
this pull request
Dec 7, 2020
* clean PR with the current gradient state * Update derivatives_base.py * Update hessian.py * Update test_grad.py * add notebooks * Typing, Linting * Update gradient_framework.ipynb * typing qfi * enable gradients for VQAlgorithms * remove old files and notes * enfoce num chars <= 100 * fix an import * re-adjust import * fix other imports * additional base classes * test cases pass and the core logic all works. Doc strings could use another look. Same goes for some of the class method names inside of LinCombQFI and OverlapQFI * Update derivatives_base.py (qiskit-community/qiskit-aqua#75) * Update derivatives_base.py Added some doc-strings to several methods inside of derivatives_base.py. Also simplified the logic of `erase_operator_coeffs` by removing some leftover logic from previous implementations. * Update qiskit/aqua/operators/gradients/derivatives_base.py Co-authored-by: Julien Gacon <jul@zurich.ibm.com> * update ordering/naming * reshuffle, rename * add VQE gradient unittest * add notebook B2Meeting This notebook will be removed after today - sorry but this is the best way to share this notebook with @bryce * Update gradient_framework_reduced.ipynb * removed a leftover notebook file * removed the notebooks (and am pushing them to a cleaned up QGradients repo) * Update gradient.py This small change prevents trivial/zero operators from appearing in SummedOps during product rule computations. * will be deleted need this to pull sry * fix qfi docstring * Add retworkx version check * delete notebooks, fixed seed fin_diff circSampler, fix kwargs import error * Delete test_natural_gradient.py * fix symbol map in parameter expression grad * typing * Update qfi.py * typing * Update test_grad.py * added a docstring to unroll_operator * Update hessian.py * Update gradient.py * Fix statevector check (not always a QuantumInstance) * Update hessian.py * fix lint of qiskit/aqua/operators/gradients/*.py * fix lint of qiskit/aqua/operators/gradients/circuit_gradients/*.py * fix lint of qiskit/aqua/operators/gradients/circuit_qfis/*.py * fix test_grad * Copy folder * remove unknown aqua changes * fix ListOp, VQAlgorithms for gradients * VQE Gradients import * update operators init * rm some changes not related to gradients * mypy fixes * skip jax test if not installed * try to fix cyclic import * fix lint in isinstance * uncomment vqe tests + consistent HAS_JAX * mypy fixes * ignore mypy warning from opbase.coeff * fix isinstance used w/ typehints * try fixing sphinx * ignore cases mypy doesn't understand correctly * fix unnecessary else after raise * Add jax to github actions * fix spell * add jax dependency to actions lint * fix spell * Reduce VQE Iterations in unittest * Use ImportError * fix lint * Add gradient framework release note * update gradient framework release note * fix reno formatting errors * Update to documentation * Fix doctring to avoid warnings * update gradient init * update qaoa docstring * remover retworkx check * update docstrings * lint fixes * update docstrings to hint max_evals_grouped deprecation if gradient is given * Update test_grad.py Several high-level function calls still used a `method=...` argument in the initialization; however, we changed this to `grad_method`, `hess_method`, `qfi_method`. So I updated these arguments. This was causing some tests to not be carried out as the default argument was inferred when the correct argument name was not assigned a method type. * Update test_grad.py Added a test case for Hessian.py that forces it to differentiate an operator with a custom combo_fn * Update lin_comb circuit gradients to fix hessian evaluation * Move renamed gradient test into operator file * update lin_comb * update lin_comb gradients * fix lint * fix lin_comb * fixed the bugs that were causing Hessian logic to fail with custom combo_fns * increase coverage of natural gradient * merge zoufalc gradients * try all combinations of grad_method and qfi_method * style fix * updates for hessians * remove redundant line * make fixes * remove hessian from grad * relax VQE test * remove redundant lambda * fix identation * fix spelling * fix whitespace * revert qfi_method in test_natural_gradient * revert param name * fix lint * remove redundant comment * update identation * fix np.random.seed * increase coverage for lin_comb * fix lint * lint * whitespace fix * docstring * lint * disable misspelling * add yy, zz to pylintdict * Update __init__.py updated the gradients __init__ file with some of the content from the release note * fixed linting * update init file * fix spell * fix spelling * remove redundant import * attempt to fix sphinx qiskit-community/qiskit-aqua#1 * Update qiskit/aqua/operators/gradients/qfi.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * try to fix sphinx no.2 * add words to pylintdict * fix cryoris comments * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/circuit_qfis/lin_comb_full.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * cryoris comments * delete unneccessary * Update qiskit/aqua/operators/gradients/hessian.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * raise warning hessians * include docstring TypeError * Update qiskit/aqua/operators/gradients/circuit_qfis/overlap_diag.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Update qiskit/aqua/operators/gradients/gradient.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * remove unnecessary os comment * Update qiskit/aqua/operators/gradients/circuit_gradients/lin_comb.py Co-authored-by: Julien Gacon <gaconju@gmail.com> * Insert proper Error * apply changes from code review Co-authored-by: Cryoris <jules.gacon@googlemail.com> Co-authored-by: Takashi Imamichi <imamichi@jp.ibm.com> Co-authored-by: Bryce-Fuller <Bryce.Fuller@ibm.com> Co-authored-by: Julien Gacon <jul@zurich.ibm.com> Co-authored-by: Manoel Marques <manoel.marques@ibm.com> Co-authored-by: Manoel Marques <manoel@us.ibm.com> Co-authored-by: woodsp <woodsp@us.ibm.com> Co-authored-by: Steve Wood <40241007+woodsp-ibm@users.noreply.github.com> Co-authored-by: Julien Gacon <gaconju@gmail.com>
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Summary
This PR adds a gradient framework implementation into the operator flow.
Details and comments
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