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Quadram Institute Bioscience

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  1. socru socru Public

    Order and orientation of complete bacterial genomes

    Python 27 6

  2. dadaist2 dadaist2 Public

    Dadaist2 🟨 Highway to R

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  3. albatradis albatradis Public

    Comparative TraDIS analysis

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  4. phage-annotation-workshop phage-annotation-workshop Public

    Phage Annotation Workshop 2021

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  5. parallel-virfinder parallel-virfinder Public

    Run virfinder in parallel

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  6. scagaire scagaire Public

    Python 6 2

Repositories

Showing 10 of 102 repositories
  • ARG-Sniper Public

    Benchmarking of AMR detection tools using shot-gun metagenomic datasets

    quadram-institute-bioscience/ARG-Sniper’s past year of commit activity
    Python 0 Apache-2.0 2 0 0 Updated Jan 8, 2025
  • readfx Public Forked from telatin/readfx

    SeqFu FASTX parser (klib)

    quadram-institute-bioscience/readfx’s past year of commit activity
    Nim 0 MIT 3 0 0 Updated Jan 8, 2025
  • QuaTradis Public

    A pipeline to analyse transposon directed insertion-site sequencing

    quadram-institute-bioscience/QuaTradis’s past year of commit activity
    Gnuplot 3 GPL-3.0 0 4 0 Updated Jan 7, 2025
  • binfie-notes Public Forked from wowthemesnet/mediumish-theme-jekyll

    Bioinformatics notes

    quadram-institute-bioscience/binfie-notes’s past year of commit activity
    JavaScript 0 MIT 1,578 0 0 Updated Dec 29, 2024
  • cloudgene3 Public Forked from genepi/cloudgene3

    A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.

    quadram-institute-bioscience/cloudgene3’s past year of commit activity
    Java 0 MIT 2 0 0 Updated Dec 14, 2024
  • cg-irida Public

    Cloudgene yaml for https://github.com/quadram-institute-bioscience/nf-irida

    quadram-institute-bioscience/cg-irida’s past year of commit activity
    0 0 0 0 Updated Dec 12, 2024
  • nf-irida Public Forked from thanhleviet/nf-irida

    Simple NF workflow for preparing sample sheet of data from IRIDA

    quadram-institute-bioscience/nf-irida’s past year of commit activity
    Python 0 1 0 0 Updated Dec 12, 2024
  • mc-spike Public Forked from RHaagmans/mc-spike
    quadram-institute-bioscience/mc-spike’s past year of commit activity
    R 0 GPL-3.0 1 0 0 Updated Nov 27, 2024
  • n50 Public

    Calculate N50 from FASTA and FASTX files

    quadram-institute-bioscience/n50’s past year of commit activity
    C 0 MIT 0 0 0 Updated Nov 21, 2024
  • st_illumina_sample_sheet_validator Public

    Sample sheet validator for demultiplexing Illumina runs

    quadram-institute-bioscience/st_illumina_sample_sheet_validator’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Nov 7, 2024
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