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I couldn't run gosummaries for KEGG and Reactome annotations until I realized that the annotation domain names for these databases have changed from "ke" and "re" to "keg" and "rea", respectively, in g:Profiler output. Currently, the gosummaries function documentation lists the former two names as the values for the go_branches argument. Could you please update the documentation to include the new domain names as go_branches values?
Best regards,
Mario
The text was updated successfully, but these errors were encountered:
Hi Raivo,
I couldn't run gosummaries for KEGG and Reactome annotations until I realized that the annotation domain names for these databases have changed from "ke" and "re" to "keg" and "rea", respectively, in g:Profiler output. Currently, the gosummaries function documentation lists the former two names as the values for the go_branches argument. Could you please update the documentation to include the new domain names as go_branches values?
Best regards,
Mario
The text was updated successfully, but these errors were encountered: