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Domain names have changed in g:Profiler output #5

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mariosaare opened this issue Mar 21, 2018 · 0 comments
Open

Domain names have changed in g:Profiler output #5

mariosaare opened this issue Mar 21, 2018 · 0 comments

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@mariosaare
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Hi Raivo,

I couldn't run gosummaries for KEGG and Reactome annotations until I realized that the annotation domain names for these databases have changed from "ke" and "re" to "keg" and "rea", respectively, in g:Profiler output. Currently, the gosummaries function documentation lists the former two names as the values for the go_branches argument. Could you please update the documentation to include the new domain names as go_branches values?

Best regards,
Mario

raivokolde pushed a commit that referenced this issue Mar 27, 2018
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